You want to work on exciting ML problems with real-world impact? I have an open ML postdoc position to work on foundational ML challenges, leading projects, & collaborating w/ other researchers in healthcare/genomics. Contact me to learn more; apply here: apply.refline.ch/845721/6452/pu…

Our work on analyzing splicing in cancer is finally out. Many tumors contain numerous neojunctions not found in normal samples and neojunctions can be confirmed by MS and form a class of potential neoantigens. Andre Kahles (@[email protected]) Oliver Stegle Oliver Kohlbacher - Now @okohlbacher.bsky.social cell.com/cancer-cell/fu…

at #NeurIPS2018, looking for a #postdoc, and interested in #healthcare? the biomedical informatics group at ETH Zurich is hiring! send me a DM, or find me or my supervisor Gunnar Rätsch (Gunnar Rätsch) in Montreal this week! more info: bmi.inf.ethz.ch/opportunities/… #ml4health #jobfairy

Great work, Natalie. Congrats on your achievements and for defending your thesis! Natalie Davidson 🛼

Development of early warning system of circulatory failure in ICUs w/ Bern University hospital data; externally validated on MIMIC data. Great collaborative work w/ _hylandSL - not here, Martin Faltys, members of Raetschlab & @AGKBorgwardt, Karsten Borgwardt & Tobias Merz. arxiv.org/abs/1904.07990

We established a new postdoc program between groups at ETH and Google Research Zurich and look for outstanding candidates to work on ML (gen. models, disentanglement/representation/cross-task learning, RL, theory of DL, systems for ML). Apply here: apply.refline.ch/845721/7118/pu…

Let’s fight the COVID-19 pandemic together! Please fill out this <1min survey covid19survey.ethz.ch to help us track COVID-19 related symptoms in Switzerland. Don't forget to fill it out daily to better help us track the pandemic. #covid19surveyCH #covid19survey

Slides from my talk at Human Variome meeting about recent BRCAexchange.org developments: slideshare.net/gxxr/brca-exch… #brca #ga4gh

NumFOCUS adds Shogun Machine Learning Toolbox to Sponsored Projects numfocus.org/blog/numfocus-… via @numfocus @ShogunToolbox

Lab member Natalie Davidson talks about integrative analysis of RNA and DNA alterations in ICGC/PCAWG samples #ismbeccb2017 #hitseq2017

Group member André Kahles talks about large-scale dynamic labeled meta genome graphs #ismbeccb2017 #hitseq2017

Group is active in 3 newly funded Personalized Health research projects: a) Cancer Genomics & ML for Immunotherapy; b) ML & Metagenomics for Sepsis and c) MIDATA Citizen engagement and data sharing platform. Hiring soon! #SPHN #PHRT bmi.inf.ethz.ch/news/article/p…

I'm seeking a highly motivated postdoctoral researcher w/ strong machine learning background to join us in our vision to push state-of-the-art in ML and address major challenges arising in biomedicine. Talk to me at #nips2017. bmi.inf.ethz.ch/opportunities/…

New #ICGC #PCAWG Manuscript on germline & somatic effects on gene expression and ASE. Great joint work with groups of Alvis Brazma, Zemin Zhang, Roland Schwarz, Oliver Stegle. "Assessing the Gene Regulatory Landscape in 1,188 Human Tumors", biorxiv.org/content/early/…

Recent work on using Boosting optimization techniques for variational inference was accepted at #AISTATS2018. arxiv.org/abs/1708.01733

Two new manuscripts w/ Andre Kahles (@[email protected]) on compression of large annotations on genome graphs: loss-less & succinct (50x for 1000 bits): biorxiv.org/content/early/… and lossy & very small (1000x for 1000 bits): biorxiv.org/content/early/…

I have an open postdoc position in cancer genomics (collaborative projects: a) cancer omics clinical trial w/ many/new data modalities together with hospitals and industry, b) collaboration with George Coukos lab on immunotherapy trials w/ RNA-seq & WGS). apply.refline.ch/845721/6050/pu…

New manuscript of ICGC PCAWG-3 is finally out. Great collaborative work on comprehensive characterization of RNA alterations in cancer w/ Angela Brooks, Alvis Brazma, Oliver Stegle, Roland Schwarz, Andre Kahles (@[email protected]) Lara Urban Jonathan Göke Natalie Davidson 🛼 & more. #PCAWG biorxiv.org/content/early/…

Personalized Health conference in June 2018 in Zurich organized by NEXUS Personalized Health 2018 personalizedhealth.nexus.ethz.ch

ETH Zurich is continues to strongly commit to new developments in medicine & technology. There is an open position for a professor in Medical Informatics in the Department of Computer Science. Happy answer questions about the position. Deadline April 30th. ethz.ch/en/the-eth-zur…