Erik Bakkeren
@erikbakkeren
Incoming Assistant Prof. at U. Calgary | Understanding and editing microbiomes using ecology | Mountain and trail runner | 🇨🇦 in 🇬🇧, PhD in 🇨🇭(he/him)
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https://erikbakkeren.com/ 21-06-2015 02:04:31
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Excited to share our new paper led by the brilliant Jordy Evan Sulaiman studying how strain and nutrient variations impact C. difficile gut microbiota interactions. We use synthetic communities and dynamic modeling to provide new insights nature.com/articles/s4146…
Our latest paper is out in PLOS Biology! We explored how our favourite pathogen Citrobacter responds to gut pH changes during infection! Brett Finlay UBC Science
THREE assistant professor faculty positions in microbiology at Yale! (1/3) Microbial Pathogenesis YaleMicroPath: apply.interfolio.com/151755, deadline 10/15. Virologists, please apply.
Thinking about doing a postdoc? Wondering what we do all day?? Christoph Ziegenhain @sofiavanmoorsel and I tracked over 19 months (!) of work & compared it to our junior postdoc data from 6 yrs ago - check out our article! #AcademicChatter #AcademicTwitter #phdchat elisagranato.com/days-in-the-li…
Right at Christmas🎄! Our work looking at the long-term growth & evolution of C. diff in the context of human gut communities is out in Cell Host & Microbe cell.com/cell-host-micr… Wouldn't be possible without the amazing co-authors Yili Qian Jericha Mill Judith Simcox PhD Ophelia Venturelli
Our paper on gut bacterial competition is out Cell Host & Microbe. Another very cool D-BIOL @ ETH Zurich & Universität Zürich collaboration with fantastic colleagues and friends involved. Huge thanks to Swiss National Science Foundation NCCR Microbiomes & EMBO Fellows for the continuous support. cell.com/cell-host-micr…
Out today, Cell Host & Microbe! Microbiomes have many benefits, but they are also often incredibly diverse and variable. This makes them hard to understand and even harder to engineer. In our new review, we argue that the key may lie in microbial metabolism! sciencedirect.com/science/articl…