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CoSy.Bio

@cosybio_uhh

Computational Systems Biology research group at the University Hamburg @UHHMIN

ID: 1295412749825183744

linkhttps://www.cosy.bio calendar_today17-08-2020 17:31:17

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CoSy.Bio (@cosybio_uhh) 's Twitter Profile Photo

We wrapped up a productive dAIbetes Steering Committee Meeting last week in Boston! Great discussions on how privacy-preserving #AI can advance #DiabetesResearch and #PersonalizedPatientCare. Jan Baumbach

We wrapped up a productive <a href="/dAIbetes_EU/">dAIbetes</a> Steering Committee Meeting last week in Boston! Great discussions on how privacy-preserving #AI can advance #DiabetesResearch and #PersonalizedPatientCare. 

 <a href="/janbaumbach/">Jan Baumbach</a>
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Join CoSy.Bio in Hamburg! We are looking for a System Administrator to support our team. 🔧 Linux/macOS | HPC | Automation | Bioinformatics 📍 Hamburg 🗓️ Apply by June 27 🔗 stepstone.de/stellenangebot… Jan Baumbach

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Introducing DREAMER, a groundbreaking tool that identifies mechanisms of #AdverseDrugReactions (ADRs) by linking drug and disease phenotypes to protein interaction networks. Here, DREAMER revealed #MolecularMechanisms behind 67 ADRs. Jan Baumbach sciencedirect.com/science/articl…

Introducing DREAMER, a groundbreaking tool that identifies mechanisms of #AdverseDrugReactions (ADRs) by linking drug and disease phenotypes to protein interaction networks. Here, DREAMER revealed #MolecularMechanisms behind 67 ADRs.
<a href="/janbaumbach/">Jan Baumbach</a>  

sciencedirect.com/science/articl…
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We compared various models predicting changes in #KneePain of #Osteoarthritis patients due to participation in supervised education and exercise and propose a concise 6-variable model for personalized prediction. Jan Baumbach Linda Baumbach, Ph.D. rehab.jmir.org/2025/1/e60162

We compared various models predicting changes in #KneePain of #Osteoarthritis patients due to participation in supervised education and exercise and propose a concise 6-variable model for personalized prediction.

<a href="/janbaumbach/">Jan Baumbach</a> 
<a href="/Baumbach_Linda/">Linda Baumbach, Ph.D.</a> 

rehab.jmir.org/2025/1/e60162
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Defective interfering particles (DIPs) as potential novel #Antivirals! Our meta-analysis of 20 #Influenza datasets provides insights for selecting candidates for antiviral treatment design. Jan Baumbach Tanja Laske academic.oup.com/nargab/article…

Defective interfering particles (DIPs) as potential novel #Antivirals! Our meta-analysis of 20 #Influenza datasets provides insights for selecting candidates for antiviral treatment design.

<a href="/janbaumbach/">Jan Baumbach</a> 
<a href="/mathbiotanja/">Tanja Laske</a> 

academic.oup.com/nargab/article…
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When is "good enough" actually good enough for #PrognosticModels? Our commentary tackles this question with a structured analysis of 16 scenarios + practical approaches for development decisions for healthcare-related prognostic models. Jan Baumbach

When is "good enough" actually good enough for #PrognosticModels? Our commentary tackles this question with a structured analysis of 16 scenarios + practical  approaches for development decisions for healthcare-related prognostic models.
<a href="/janbaumbach/">Jan Baumbach</a>
CoSy.Bio (@cosybio_uhh) 's Twitter Profile Photo

Presenting DIGGER 2.0: we extended our #AlternativeSplicing software DIGGER with new functionalities, including support of the mouse interactome and NEASE for #EnrichmentAnalysis! Check it out here: exbio.wzw.tum.de/digger/ Jan Baumbach

Presenting DIGGER 2.0: we extended our #AlternativeSplicing software DIGGER with new functionalities, including support of the mouse interactome and NEASE for #EnrichmentAnalysis! Check it out here: exbio.wzw.tum.de/digger/

<a href="/janbaumbach/">Jan Baumbach</a>
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We introduce DRaCOoN 🐉: a Python package and web tool designed for pathway-level #DifferentialCoexpression analysis. It features a unique benchmarking framework and demonstrates robust performance across various #Transcriptomics datasets. Jan Baumbach

We introduce DRaCOoN 🐉: a Python package and web tool designed for pathway-level #DifferentialCoexpression analysis. It features a unique benchmarking framework and demonstrates robust performance across various #Transcriptomics datasets.

 <a href="/janbaumbach/">Jan Baumbach</a>
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Studying #BoneTissue proteins can be likened to finding a needle in a haystack of collagen. Our new protocol eliminates collagen interference without the use of enzymes, yielding 68% more proteins identified. #proteomics Jan Baumbach Tanja Laske pubs.acs.org/doi/10.1021/ac…

Studying #BoneTissue proteins can be likened to finding a needle in a haystack of collagen. Our new protocol eliminates collagen interference without the use of enzymes, yielding 68% more proteins identified. #proteomics 

<a href="/janbaumbach/">Jan Baumbach</a> 
<a href="/mathbiotanja/">Tanja Laske</a> 

pubs.acs.org/doi/10.1021/ac…
CoSy.Bio (@cosybio_uhh) 's Twitter Profile Photo

🚀🦠 Exciting discussions at the Microb-AI-ome Steering Committee Meeting in Vienna! Great to see progress at the intersection of #MicrobiomeResearch and #AI! Jan Baumbach

🚀🦠 Exciting discussions at the <a href="/MicrobAIome_EU/">Microb-AI-ome</a> Steering Committee Meeting in Vienna! Great to see progress at the intersection of #MicrobiomeResearch and #AI!

<a href="/janbaumbach/">Jan Baumbach</a>
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#Acne and other #SkinDisorders are often linked to the sebaceous gland (SG). We provide a detailed molecular map of the human SG, revealing dynamic differentiation of sebocytes and identifying new #GeneMarkers, providing a valuable reference for future research. Jan Baumbach

#Acne and other #SkinDisorders are often linked to the sebaceous gland (SG). We provide a detailed molecular map of the human SG, revealing dynamic differentiation of sebocytes and identifying new #GeneMarkers, providing a valuable reference for future research.

<a href="/janbaumbach/">Jan Baumbach</a>
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✨ Congratulations to Faren, the winner of the Young Investigator Award #RExPO25! This is a truly well-deserved recognition of her outstanding research and impact. 👏 REPO4EU

✨ Congratulations to Faren, the winner of the Young Investigator Award #RExPO25! This is a truly well-deserved recognition of her outstanding research and impact. 👏 <a href="/REPO4EU/">REPO4EU</a>
CoSy.Bio (@cosybio_uhh) 's Twitter Profile Photo

We present FedscGen, a federated, #PrivacyPreserving method (built on scGen) batch-effect correction tool to help analyze distributed #scRNAseq datasets. Jan Baumbach genomebiology.biomedcentral.com/articles/10.11…

We present FedscGen, a federated, #PrivacyPreserving method (built on scGen) batch-effect correction tool to help analyze distributed #scRNAseq datasets.

<a href="/janbaumbach/">Jan Baumbach</a> 

genomebiology.biomedcentral.com/articles/10.11…
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🚨 Wir suchen Verstärkung in der Systemadministration! Du hast Lust auf spannende Aufgaben und ein motiviertes Team? Dann bewirb dich jetzt und werde Teil von CoSy.Bio! 👉 uni-hamburg.de/stellenangebot… #SysAdmin #ITJobs #Hamburg Jan Baumbach