Jinxin Phaedo Chen (@chenphaedo) 's Twitter Profile
Jinxin Phaedo Chen

@chenphaedo

PhD student @BicroLabs at @karolinskainst and @scilifelab; previous BIOPICian @PKU1898; Developing next-gen sequencing techniques; 3D genome organization

ID: 1344531460200415234

linkhttp://www.jphaedochen.com/ calendar_today31-12-2020 06:31:28

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Silas E Busch (@si_plasticity) 's Twitter Profile Photo

Inspired by Cajal, the Hansel lab's new work in eLife - the journal provides a comparative histological analysis of human and mouse Purkinje cell morphology. Following our 2023 study, we detail differences of scale and kind between the neurons of the two species 🧵👇 elifesciences.org/articles/105013

bioRxiv Genomics (@biorxiv_genomic) 's Twitter Profile Photo

Cell-type-specific transposable element demethylation and TAD remodeling in the aging mouse brain biorxiv.org/content/10.110… #biorxiv_genomic

Mrinmoy Pal (@palmrinmoy) 's Twitter Profile Photo

🧵How does the genome find its place in the 3D space of the nucleus after fertilization? Out now Cell: cell.com/cell/fulltext/… 👇 A thread 👇

Ben Sabari (@bsabari) 's Twitter Profile Photo

I am excited to share the latest paper from my lab where we leverage the selection bias of condensate-promoting oncofusions to uncover molecular rules governing condensate specificity and function. cell.com/cell/fulltext/….

I am excited to share the latest paper from my lab where we leverage the selection bias of condensate-promoting oncofusions to uncover molecular rules governing condensate specificity and function. cell.com/cell/fulltext/….
Effie Apostolou (@efapostolou29) 's Twitter Profile Photo

Thank you Weill Cornell Medicine newsroom for featuring our Molecular Cell study with Dr. Fine on the identification and perturbation of three-Dimensional Gene Hubs in Brain Cancer. news.weill.cornell.edu/news/2025/04/t…

Román Gonzalez-Prieto (@hombrerro) 's Twitter Profile Photo

New preprint from the Lab at Cabimer. We present PLAMseq, using TurboID to do like ChIPseq and proximity proteomics in the same protocol with extra powers like mapping protein interactions in the genome. biorxiv.org/content/10.110…

Olivier Duss (@olivierduss) 's Twitter Profile Photo

The timeline of co-transcriptional #mRNA processing and #modification may have to be revised: cleavage, termination, and #m6A deposition may occur earlier than most #splicing! Potential textbook changing study by Eduardo Eyras & Hayashi labs! AJ Sethi biorxiv.org/content/10.110…

Sangwoo Park (@realsangwoopark) 's Twitter Profile Photo

"Native nucleosomes know where to go!” Our Condense-seq paper is now published in Nature! 📄 nature.com/articles/s4158… I’m deeply grateful to my PhD advisor Taekjip Ha and our incredible collaborators The Muir Lab , Bin Zhang , Erika Pearce, and Ben Garcia lab!!

Guo-Cheng Yuan (@gc_yuan) 's Twitter Profile Photo

We are excited to announce our latest work on spatial omics data analysis has just been published! In this paper, we developed a new method called ONTraC for studying the spatially continuous variations of tissue microenvironment (ME). link.springer.com/article/10.118…

ShorterLab (@shorterlab) 's Twitter Profile Photo

Spatiotemporal deciphering of dynamic the FUS interactome during liquid-liquid phase separation in living cells: nature.com/articles/s4146…

antisense. (@razoralign) 's Twitter Profile Photo

Bonsai: Tree representations for distortion-free visualization and exploratory analysis of single-cell omics data biorxiv.org/content/10.110…

Bonsai: Tree representations for distortion-free visualization and exploratory analysis of single-cell omics data biorxiv.org/content/10.110…
bioRxiv Synthetic Biology (@biorxiv_synbio) 's Twitter Profile Photo

Multiplexed, scalable analog recording of gene regulation dynamics over weeks using intracellular protein tapes biorxiv.org/content/10.110… #biorxiv_synbio

Jiayu Su (@edjiayu) 's Twitter Profile Photo

[1/n]📢How is your spatial analysis *transcript*-omic if transcripts are only aggregated to gene counts? Introducing SPLISOSM, our new computational method for learning the isoform landscape and its regulation from spatial transcriptomics data doi.org/10.1101/2025.0…

Patrick Hsu (@pdhsu) 's Twitter Profile Photo

Stylus originated from a wonderful scientific collaboration discovering serine DNA recombinases with Ami Bhatt, Lacra Bintu, and Michael C Bassik spearheaded by star researchers Matt Durrant Alison Fanton Josh Tycko A huge thanks also to Cosmas Giallourakis and Emily Minkow for their

Stylus originated from a wonderful scientific collaboration discovering serine DNA recombinases with Ami Bhatt, <a href="/BintuLacra/">Lacra Bintu</a>, and <a href="/MCBassik/">Michael C Bassik</a> spearheaded by star researchers <a href="/mgdurrant/">Matt Durrant</a> <a href="/AlisonFanton/">Alison Fanton</a> <a href="/JoshTycko/">Josh Tycko</a>

A huge thanks also to Cosmas Giallourakis and <a href="/eminkow/">Emily Minkow</a> for their
Nature Methods (@naturemethods) 's Twitter Profile Photo

Introducing FISHnet, a graph-theory-based method for sensitive and specific identification of chromatin domains from single-cell sequential Oligopaints data. nature.com/articles/s4159…

Jinxin Phaedo Chen (@chenphaedo) 's Twitter Profile Photo

Thank you Itai Yanai and the everyone for such exceptional workshops! It's valuable in expanding my perspectives and mindsets. These workshops are essential for researchers. I'll more enjoy the epiphanies and mystic encounters in my contradictory data now 🐘☕!

Nature Chemical Biology (@nchembio) 's Twitter Profile Photo

A new paper reveals that m6A is enriched in gamma satellite DNA II RNA transcripts, regulating satellite transcription and chromosome segregation nature.com/articles/s4158…