Every day this week, we'll share a small example of how BioNumPy can be used. First out: FASTQ filtering (try out the code yourself here: colab.research.google.com/github/bionump…) .. and remember to follow us for daily updates ☺️

Day 2/5 of small BioNumPy examples: Motif matching. We download a motif from Jaspar, compute max motif score per read in a FASTQ file and plot a histogram of the scores. Run the code here: colab.research.google.com/github/bionump…

Day 3 of small BioNumPy examples: Plotting the mean base qualities across reads. Try out the code here: colab.research.google.com/github/bionump… .. and remember to follow us for daily examples😋

Day 4 of small #BioNumPy examples: Sequence matching (searching for a sequence in a set of reads). Try out the code here: colab.research.google.com/github/bionump…

Day 5/5 of short BioNumPy examples: Finding the most common kmers in a FASTQ-file. Try out the code here: colab.research.google.com/github/bionump… Check out our documentation for more cool examples: bionumpy.github.io/bionumpy🤠

And we're now published in Nature Methods 🥳 Full article here: nature.com/articles/s4159…