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Its about time we started tweeting... Our paper on a central role for histone variant chromatin in the mammalian circadian clock mechanism is out in Nature Structure & Molecular Biology. rdcu.be/cN9Ui Kudos to Francesca and Kevin (pictured) and all co-authors!

Modified fibroblasts cells imaged and analysed in the frame of the Reveal project. Heterogeneity in lung fibroblast cells in 2D culture REVEALed 👀 Experiment at IGFL @ENSdeLyon, deep learning analysis at CEA-Leti

Hello! Last week our work on TrackMate was published. @guijacquemet already tweeted about it, and in this small thread I would like to highlight a bit the story and the technical part behind the paper. 1/n

We are trying something new today: coffee with BioImage analysts, with a new topic every time. Today we are discussing how to use DL for whole-cell segmentation as a biologist with no coding experience. Let's see if this lowers the threshold for people to attend! Turku BioImaging

Single cell analysis is getting FULL POWER in the European project REVEAL. Experiment at IGFL @ENSdeLyon, deep learning analysis at CEA-Leti. Thanks to #cellpose + #TrackMate on lens-free microscopy phase images IPRASENSE - Cell Culture Monitoring Instruments.

Single cell analysis is finding rectangluar cells in the European project REVEAL. Experiment Kiran Padmanabhan, deep learning analysis at CEA-Leti. Thanks to #cellpose + #TrackMate on lens-free microscopy phase images IPRASENSE - Cell Culture Monitoring Instruments.

Check out our new paper on bioRxiv: 3D single-cell shape analysis of cancer cells using geometric deep learning biorxiv.org/content/10.110… MACH3Cancer

I am pleased to share with you my review about cell types, published in Cell yesterday. 1/ What is a cell type and how to define it? cell.com/cell/fulltext/…

We felt the need to write a text to the memory of Michel Bornens, a visionay scientist, who passed away in March. We miss him a lot. journals.biologists.com/jcs/article/13…

Single cell analysis is finding time in the European project REVEAL . Experiment Kiran Padmanabhan, deep learning analysis at CEA-Leti. Thanks to #cellpose + #TrackMate on lens-free microscopy phase images IPRASENSE - Cell Culture Monitoring Instruments.

Single cell analysis is finding time in the European project REVEAL. Experiment Kiran Padmanabhan , deep learning analysis at CEA-Leti . Thanks to cellpose + #TrackMate on lens-free microscopy phase images IPRASENSE - Cell Culture Monitoring Instruments.

1/ Last week delegation of CEA-Leti with Cédric came to Warsaw Warsaw University of Technology to work on Reveal Project at CEZAMAT Politechniki Warszawskiej Why the guys look like working in a lab on Mars?

European project REVEAL is measuring dry mass of millions of cells. Experiment Kiran Padmanabhan, deep learning analysis at CEA-Leti. Thanks to Cellpose + #TrackMate on lens-free microscopy phase images IPRASENSE - Cell Culture Monitoring Instruments.

Congratulations Harald F. Hess of HHMI | Janelia, winner of the 2023 National Academy of Sciences James Prize in Science and Technology Integration for pioneering work in optical and electron microscopy! #NASaward #academia #microscopy

Sunday at Janelia

to be presented: AI and biology embl.org/about/info/cou… via EMBL

to be presented: AI and biology embl.org/about/info/cou… via EMBL

Decomposing heterogeneous dynamical systems with graph neural networks HHMI | Janelia arxiv.org/pdf/2407.19160

⭐ Join the CellMap Segmentation Challenge! ⭐ Compete to create the next, best #AI-driven image segmentation model using hundreds of our meticulously annotated high-resolution EM images as training data. Competition starts end of Oct. Sign up today ➡️ cellmapchallenge.janelia.org