afids (@afids_project) 's Twitter Profile
afids

@afids_project

anatomical fiducials project
#openscience #neuroanatomy #neuroimaging #stereotaxy

ID: 1175139657891360768

linkhttps://afids.github.io/afids-protocol/ calendar_today20-09-2019 20:08:34

258 Tweet

102 Takipçi

233 Takip Edilen

Brian Edlow (@comarecoverylab) 's Twitter Profile Photo

We mapped the connectivity of brainstem pathways that sustain human consciousness. A decade in the making... Preprint: biorxiv.org/content/10.110… Ex vivo MRI: openneuro.org/datasets/ds004… Histology: histopath.nmr.mgh.harvard.edu/images/?page=i… Atlas: datadryad.org/stash/dataset/… Code: github.com/ComaRecoveryLa…

Mohamad Abbass (@mohamadabbass19) 's Twitter Profile Photo

Check out our latest #preprint investigating the millimetric impact of localization & registration accuracy on DBS electrode position in stereotactic space.🎯 doi.org/10.1101/2024.0… Powered by: afids Lead-DBS #fMRIprep 3D Slicer BIDS-standard [1/9]

Check out our latest #preprint investigating the millimetric impact of localization & registration accuracy on DBS electrode position in stereotactic space.🎯 

doi.org/10.1101/2024.0…

Powered by: <a href="/afids_project/">afids</a> <a href="/leaddbs/">Lead-DBS</a> #fMRIprep <a href="/3DSlicerApp/">3D Slicer</a> <a href="/BIDSstandard/">BIDS-standard</a> [1/9]
Mohamad Abbass (@mohamadabbass19) 's Twitter Profile Photo

Finally, it is important to emphasize transparent & open software development, specifically Lead-DBS, #fMRIprep, BIDS-standard, w/ afids & data (doi.org/10.1038/s41597…) making this analysis possible. #openscience #stereotaxy Data/scripts: github.com/afids/afids-dbs [9/9]

Jonathan C. Lau (@jclauneuro) 's Twitter Profile Photo

Ever wondered about the current state of registration accuracy for #DBS electrodes in "MNI" space?🧠🎯 Some have used voxel overlap, but to our knowledge, there have not been any millimetric estimates.📏 Check out Mohamad Abbass's deep dive.🤿 Comments/suggestions welcome!🙏

Alejandro de la Vega (@neurozorro.bsky.social) (@elneurozorro) 's Twitter Profile Photo

NeuroVault is celebrating over a decade of researchers openly sharing brain maps! 🧠 We're looking back at the amazing growth & what's next. But first... 🚨We need your help! 🚨 Take our survey to shape the future of NeuroVault & data sharing! tally.so/r/wLP2Oj

ApertureNeuro (@apertureohbm) 's Twitter Profile Photo

Do you use fslmaths for image processing? In our latest publication, Rorden et al. introduce niimath, a clone that offers performance optimization, improved portability, and open licensing doi.org/10.52294/001c.… OHBM Peter Bandettini Mallar Chakravarty

Do you use fslmaths for image processing? In our latest publication, Rorden et al. introduce niimath, a clone that offers performance optimization, improved portability, and open licensing doi.org/10.52294/001c.… <a href="/OHBM/">OHBM</a> <a href="/fMRI_today/">Peter Bandettini</a> <a href="/mallarchkrvrty1/">Mallar Chakravarty</a>
Mallar Chakravarty (@mallarchkrvrty1) 's Twitter Profile Photo

so delighted to see this published in @ApertureNeuro! Send papers about your tools! Send papers about your open datasets! Send papers about your science! Support the journal developed by OHBM for the whole community (all with a low low APC!!!).

Jonathan C. Lau (@jclauneuro) 's Twitter Profile Photo

🔊Announcement🔊! The Ali Khan & Jonathan C. Lau labs are 𝙝𝙞𝙧𝙞𝙣𝙜 𝙩𝙬𝙤✌️𝙧𝙚𝙨𝙚𝙖𝙧𝙘𝙝 𝙨𝙤𝙛𝙩𝙬𝙖𝙧𝙚 𝙙𝙚𝙫𝙚𝙡𝙤𝙥𝙚𝙧𝙨 in basic + translational neuroimaging Western University.🧠🔭 Supported by TRIDENT Western BrainsCAN. recruit.uwo.ca [Job ID: 35643 + 35752] #ldnont 🇨🇦

🔊Announcement🔊! The <a href="/neuroak/">Ali Khan</a> &amp; <a href="/jclauneuro/">Jonathan C. Lau</a> labs are 𝙝𝙞𝙧𝙞𝙣𝙜 𝙩𝙬𝙤✌️𝙧𝙚𝙨𝙚𝙖𝙧𝙘𝙝 𝙨𝙤𝙛𝙩𝙬𝙖𝙧𝙚 𝙙𝙚𝙫𝙚𝙡𝙤𝙥𝙚𝙧𝙨 in basic + translational neuroimaging <a href="/WesternU/">Western University</a>.🧠🔭

Supported by <a href="/TRIDENTPCT/">TRIDENT</a> <a href="/Brains_CAN/">Western BrainsCAN</a>.
recruit.uwo.ca [Job ID: 35643 + 35752]
#ldnont 🇨🇦
Jonathan C. Lau (@jclauneuro) 's Twitter Profile Photo

Potential dev will include #hippunfold, #snakemake, BIDS-standard, & afids among other projects with integration into preclinical and clinical applications. 🧠🎯 Check out: github.com/khanlab github.com/afids

OHBM Open Science Special Interest Group (OS-SIG) (@ohbmopen) 's Twitter Profile Photo

OHBM #Hackathon was a blast! Thanks to all our attendees and volunteers for a hugely successful programme of events. Looking forward to 2025 in Brisbane already! #ohbm2024

OHBM #Hackathon was a blast! Thanks to all our attendees and volunteers for a hugely successful programme of events. Looking forward to 2025 in Brisbane already! #ohbm2024
Alejandro de la Vega (@neurozorro.bsky.social) (@elneurozorro) 's Twitter Profile Photo

The Neurosynth Team is at #ohbm2024 in Seoul! Come learn about our automated meta-analysis tools (including a preview of AI for Neurosynth 🤖) at the poster session. Posters #2235 and #2251 on Wed/Th

Andreas Horn (@andreashorn_) 's Twitter Profile Photo

Hivemind: Does anybody have code to warp lots of coordinates across spaces using ANTs? (without writing/reading text files)? RT for reach – 🙏🙏

Alaa Taha (@alaa_t_) 's Twitter Profile Photo

Excited to be giving a talk on afids as part of #OHBM2024's #Neuroinformatics session (6/25 @ 12PM🇰🇷; GB 103) Come 👀 how we're: ➡️pooling 20K+ community curated 🧠 landmarks to 📏 registration accuracy 🎯 and for #QC ➡️creating resources/apps to simplify this process

Excited to be giving a talk on <a href="/afids_project/">afids</a> as part of #OHBM2024's #Neuroinformatics session (6/25 @ 12PM🇰🇷; GB 103)

Come 👀 how we're:
➡️pooling 20K+ community curated 🧠 landmarks to 📏 registration accuracy 🎯 and for #QC
➡️creating resources/apps to simplify this process
NIH Office of Data Science Strategy (@nihdatascience) 's Twitter Profile Photo

🚨 Please join us on July 12 for the next Data Sharing and Reuse Seminar where Satra Ghosh, Ph.D. will be presenting "The Transformative Potential and Challenges of Open Data and Technologies in Neuroscience." Register here! bit.ly/4b2zXj3

🚨 Please join us on July 12 for the next Data Sharing and Reuse Seminar where Satra Ghosh, Ph.D. will be presenting "The Transformative Potential and Challenges of Open Data and Technologies in Neuroscience."

Register here! bit.ly/4b2zXj3
INCF (@incforg) 's Twitter Profile Photo

Announcing the 10K USD INCF Open Neuroscience Award! The award: - encourages participants to test resources dev'd by large-scale brain initiatives - provides feedback to repositories re: usability & FAIRness - promotes data reuse & collaborative science bit.ly/INCFONA

Announcing the 10K USD INCF Open Neuroscience Award!

The award:
- encourages participants to test resources dev'd by large-scale brain initiatives
- provides feedback to repositories re: usability &amp; FAIRness
- promotes data reuse &amp; collaborative science

bit.ly/INCFONA