Ivar Grytten (@ivargrytten) 's Twitter Profile
Ivar Grytten

@ivargrytten

Postdoc at Sandve lab, Oslo. Interested in Pangenomics/graph-genomes, Python, bioinformatics methods/tool development, etc.

ID: 622900662

calendar_today30-06-2012 13:32:57

65 Tweet

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BioNumPy (@bionumpy) 's Twitter Profile Photo

BioNumPy has been updated with changes that make it a lot easier to work with genomic intervals and data on a reference genome 😀 Here are a few cool examples to illustrate the new stuff:

Geir Kjetil Sandve (@sandvegeir) 's Twitter Profile Photo

Very reassuring to see that almost all #RECOMB2023 talks include assessment on simulated data, even hearing "of course - since only way to have ground truth". At other venues hardly any bioinformatician could be bothered to investigate methods in fully controlled settings (1/3)

Geir Kjetil Sandve (@sandvegeir) 's Twitter Profile Photo

Finally biologists can also use numpy (array programming). Handling e.g. DNA and protein sequences with convenience and speed, like physicists and machine learners for decades have worked with numerical data: nature.com/articles/s4159… (1/3)