
ISA Metadata Toolkit
@isatools
#OpenSource tools to collect, describe & publish life, environmental, biomedical experiments with community standards; part of @ELIXIREurope enabling #FAIRdata
ID: 148662999
http://isa-tools.org 27-05-2010 08:25:16
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Thank to Philippe Rocca-Serra for contributing to ISA Metadata Toolkit and related #metadata #FAIRdata related activities at the ELIXIR Europe #BioHackEU23 !! ⬇️


Great example published GigaScience on the use of ISA Metadata Toolkit and #ROcrate to achieve #FAIRdata ➡️ doi.org/10.1093/gigasc… #omics #reproducibility #opendata - ELIXIR Europe ELIXIR UK


Our Oxford e-Research Centre #DataReadiness funded under the ELIXIR Europe #Interoperability platform for activities encompassing ISA Metadata Toolkit @fairsharing.bsky.social and the #FAIRcookbook to enable #FAIRdata ⬇️

Our Philippe Rocca-Serra is at #swat4ls to present tomorrow the ELIXIR Europe #FAIRcookbook from an industry prospective. Also great to see community work progresses around the widely adopted ISA Metadata Toolkit with mapping to #DCAT and #FHIR standard models 😜 #omics #interoperability #FAIRdata


ELIXIR Europe Yeah! Well done to al selected projectl!! Spotlight on “Project 23: MARS: Multi-omics Adapter for Repository Submissions, preparing for launch” by Bert Droesbeke, Philippe Rocca-Serra Philippe Rocca-Serra with ISA Metadata Toolkit and more at github.com/elixir-europe/…! #ELIXIR24

Well done to all selected projectl!! Spotlight on the “Project 23: MARS: Multi-omics Adapter for Repository Submissions, preparing for launch” by Bert Droesbeke, Philippe Rocca-Serra Philippe Rocca-Serra with #ISAJSON and more at github.com/elixir-europe/… #ELIXIR24

This #Biohackathon2024 “MARS multiomics brokering project” with ISA Metadata Toolkit and many #ISAJSON producing tools and platforms gets also highlighted by Flora D’Anna ELIXIR Belgium in the #ELIXIRDataPlatform session at #ELIXIR24


And Sebastian Beier #ELIXIR Germany Node flags the COPO system as another #ISAJSON compliant system - yeah it will be a great BioHackathon project and hopefully we will soon shelf #multiomics brokering challenge as “job done”! #ELIXIR24 ISA Metadata Toolkit


Philippe Rocca-Serra on latest advances with ISA Metadata Toolkit and the planned #BioHackathon project using #ISAJSON for #multiomics data brokering #ELIXIR24


Highlighting Ralf Weber of Uni of Birmingham on #metabolomics & #multiomics data integration; and Philippe Rocca-Serra of Oxford e-Research Centre on #MetadataManager tool & #FAIRdata with ISA Metadata Toolkit, testing #DataBrokering to EBI databases with #ISAJSON (github.com/elixir-europe/…) #PrecisionToxACM



📣Call for Experts The Multi-Omics Metadata Standards Working Group is seeking a software and web developer to develop their Landscape Dashboard into an interactive, web-based tool. Sounds like you? Learn more and apply: ow.ly/NFKb50TQstv LN Anderson @fairsharing.bsky.social

Note the central presence and role of #ISA in this ⬇️ #RDA group, and at upcoming Research Data Alliance (RDA) plenary there will be a presentation of the use of #ISAJSON in the ELIXIR Europe project for a common #multiomics #metadata carrier 😃

We are also present at the ELIXIR Europe #BioHackEU24 with the #MARS project “Multi-omics Adapter for Repository Submissions” a #DataBrokering initiative with #ISAJSON as #metadata carrier ⬇️ #EOSC #ELIXIR #interoperability #FAIRdata


The ELIXIR Europe #MARS #ISAJSON poster presented by Sveinung at #RDAPlenary and will features on Thursday in the #multiomics WG session ➡️ github.com/elixir-europe/…


Great presentation by Bert Droesbeke ELIXIR Belgium on behalf of ELIXIR Europe #MARS brokering initiative 4 submitting #multiomics life sciences studies to multiple repositories - already used for many EBI databases and more are joining in ➡️ github.com/elixir-europe/… #RDAPlenary

It’s time for our team to disconnect for the winter break ❄️ We're back in early Jan. Until then responses may be delayed and all support is on a best effort basis as our staff travel to visit friends and family!! Oxford e-Research Centre Engineering Science, Oxford



And check out our poster:ELIXIR Europe lands on MARS! With #ISAformats at its core! Details at ➡️ github.com/elixir-europe/… #interoperability #multiomics #omics #FAIRdata
