The CRI iAtlas Immune Features module displays the distribution of immune readouts across your selected groups. In the image, we can see the estimates of T Cells CD4 for 5 datasets, with samples grouped based on the response to #ImmuneCheckpoint Inhibitor therapy. #immunotherapy

Our Hazard Ratio module was designed to compare Cox proportional hazard ratio of immune features across the 12 Immune Checkpoint Inhibition (ICI) datasets in CRI iAtlas. #cancerGenomics #immunoOncology

The STAR Protocols publication on "Analytic pipelines to assess the relationship between immune response and germline genetics in human tumors" has been published 🥳 star-protocols.cell.com/protocols/2249

Following our #GWAS paper in Immunity, cell.com/immunity/fullt… on the #immune landscape of #cancer, we published the protocol in STAR Protocols sciencedirect.com/science/articl…. #GWAS results of the 39 immune signatures can accessed on the #pheweb site pheweb-tcga.qcri.org

Check out our newest notebook! Get an overview on how to query the CRI iAtlas to get clinical data, immune features, and quantile normalized gene expression for TCGA. #cancerGenomics #JupyterNotebook github.com/CRI-iAtlas/iat…

How do I cite CRI iAtlas? Can I add my own data to visualizations in CRI iAtlas? These are some of the questions that we included in the FAQ in our Help page! Check it out at: cri-iatlas.org/help/

What is the CRI iAtlas CRI iAtlas, and how is this interactive tool accelerating discovery for a future #Immune2Cancer? CRI iAtlas Grantee Dr. James Eddy James Eddy Sage Bionetworks describes its value in exploring and analyzing immuno-oncology data during Cancer Immunotherapy Month.

We have a collection of tutorials describing steps to common analysis in iAtlas. In one of them, you can learn how to create your custom cohort of TCGA, PCAWG or Immune Checkpoint Inhibitors datasets. Check it out at cri-iatlas.org/help/ 📒📖 #tutorial #ImmunoOncology

Our platform allows you to select a cohort: you select dataset(s) of interest, add filters, and select how samples should be grouped. The visualizations will adapt to your selection and you will be able to explore your selected cohorts! #immunoGenomics

New notebook 🚨📒! Python code to access and explore clinical annotation, immune features and gene expression of +1k samples from studies of response to Immune Checkpoint Inhibitors. #Immunotherapy #immunoOncology github.com/CRI-iAtlas/iat…

New data available in CRI iAtlas! iAtlas now includes immunogenomic data derived from the PRINCE (pancreatic cancer) and PORTER (prostate cancer) immunotherapy trials. This update also includes data on breast cancer checkpoint treatment from @NCIHTAN. Cancer Research Institute

New data available in CRI iAtlas! iAtlas now includes immunogenomic data derived from the AMADEUS immunotherapy trial. rupress.org/jem/article/22… Cancer Research Institute

We've posted another Newsletter! Dive in to learn about AACR Project GENIE, a novel feature from a #GSoC participant, new data from CRI iAtlas & The Cancer Dependency Map, and more. The newsletter also has details on a cBioPortal symposium on Nov 11 in Amsterdam. buff.ly/7gnccvd