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Please check out our paper about the universal chromatin state annotation that was learned based on data from over 1000 datasets in over 100 cell types.

Interested in #webassembly and interactive visualization of genomic data ? I'm hiring interns for Summer 2022. reach out if interested!

Interested in spatial omics 🔬🧬+ drug discovery 💊?  Come join our efforts to build a suite of optical tools for functional genomics! Now hiring for my lab in the Department of Cell & Tissue Genomics Genentech, with extensive collaborations across gRED bit.ly/SinghPSR

We're hiring! Let's make modern integrative computational methods in single cell genomics (including image-based assays) a cornerstone of our day-to-day data analysis. bit.ly/34L87ve

I know, I know, lots of people hiring... come talk to us, lots of fun problems to work on with lots of great people.

I am hiring for a pure ML research scientist role: 80% publishing with complete research freedom, 20% consulting and collaborating on applied ML, in a legendary biotech company with a vibrant scientific environment and academia-like culture. careers.gene.com/us/en/job/GENE….

Really excited to co-mentor a postdoc with @Gschuller_k!! Let's figure out how to explain what ML models make of whole genome combinatorial perturbation screens. bit.ly/3HaJ3xb

The Prescient Design team will be out in the Bay Area all of next week. If you’re in the neighborhood and interested in ML research roles and learning more about what we do at Genentech over a coffee, please reach out!

We're hiring!! Integrative visualization, spatial profiling and perturbations! Research Software Engineer - Visualization and Interactive Data Analysis : South San Francisco bit.ly/3Cp21zr

EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation biorxiv.org/cgi/content/sh… #bioRxiv

Super excited to share new work led by the *very talented* Chaichontat Sriworarat from Hopkins Neuroscience called Loopy Browser! ➰ #interactive #image #viewer #dataviz #spatial #transcriptomics #georeferencing 🔗 loopybrowser.com 📖 biorxiv.org/content/10.110… 💻 github.com/chaichontat/lo…

"Concept Bottleneck Generative Models" Aya Abdelsalam Ismail, Julius Adebayo, Hector Corrada Bravo, Stephen Ra, Kyunghyun Cho Session: Challenges in Deployable Generative Modeling Time: Fri, July 28, 11am - 12pm, 3 - 4pm HST openreview.net/pdf?id=zFOdOCh…

Ever analyze a scRNAseq dataset and wonder if a specific cell state has been seen before? And if so, where in the human body? Under what conditions? Well, now you can use our lightning fast SCimilarity search and foundational model for that! ⚡️🔎🧬 biorxiv.org/content/10.110… (1/11)

We are looking for an intern with a strong ML and interpretability background to join me, Julius Adebayo, and the amazing Prescient Design Genentech team next summer as an intern in our NYC office! We will be adding interpretability to LLMs with applications in drug discovery. 🧵1/

"Concept Bottleneck Generative Models" Aya Abdelsalam Ismail Julius Adebayo Hector Corrada Bravo Stephen Ra Kyunghyun Cho openreview.net/pdf?id=zFOdOCh…

Exciting internship opportunity in our group at Genetech

My lab has a postdoc open: careers.gene.com/us/en/job/2024… Exciting opportunity to work along our larger "Cellular States and Organization (CSO)" group within the Biology Research AI (BRAID) Department and with @Gschuller_k lab in the Cellular and Tissue Genomics (CTG) Department.

Check out our work today at #ICLR2024. We insert a concept bottleneck layer into generative models, which allows us to interpret, control, and debug them. This is a first step towards interpretable generative modeling! Julius Adebayo Hector Corrada Bravo Stephen Ra Kyunghyun Cho

it's been 3+ years since Richard Bonneau, VGligorijevic and i founded Prescient Design early 2021. from day 0, my goal has always been to build a lab-in-the-loop protein design platform (see the figure from our very early pitch deck 😂), and during the past 3+ years (mostly as

Join our ML for Genomics group working directly with me on spatial biology. careers.gene.com/us/en/job/2024…