Beyond excited to show my first 121-plex results at IMSIS 2023! A group effort contributed together by John Abbey Bodenmiller lab and AmberGen! Stay tuned for more high-plex spatial proteomics results with the #MALDI #HiPLEX technology!

Come join our team in Toronto! We are currently recruiting postdocs (Molecular and Systems Neuroscience) and a research technician (tsukaharalab.org/contact/). Please apply or RT! Also feel free to reach out to me with any questions.

How can active and self-supervised learning methods improve the efficiency of human annotation of single-cell data? Our paper exploring this (& more!) is now out ➡️ nature.com/articles/s4146…

Dream speaker lineup at our rebranded 'Quantitative Biology to molecular mechanism' conference' EMBL in November. Co-organized with Lacra Bintu Tineke Lenstra Savitski Lab Hartland Jackson . Many abstract selected talks! Register and apply 👇

Big congrats to LTRI researchers Ellen Langille in Daniel Schramek’s lab & Noor Shakfa in Hartland Jackson’s lab on receiving the inaugural Postdoctoral Research Awards from Research at Canadian Cancer Society with CIHR Terry Fox Research Institute

I think this sort of approach is going to be really important, in particular, for quantifying true cell interactions in single-cell spatial data. Expression on cell type borders often seems unique, but diffusion 𝑎𝑛𝑑 segmentation errors generally explain much of that variation.

Sorry to tell you, but your cell segmentation is never going to be perfect. Time to check out STARLING for great clusters from your spatial data🐦‍⬛ Awesome work by Jett Lee and our first of many collaborations with Kieran Campbell

Our paper on functional discovery of protein degradation and stabilization effectors with proteome-scale induced proximity screens is out in its final version! 1/ nature.com/articles/s4158… rdcu.be/dBUju

Introducing NEST, our deep-learning solution for detecting cell-cell communication on #SpatialTrascriptomics data at single-spot or #SingleCell precision! Pre-print: biorxiv.org/content/10.110… NEST: github.com/schwartzlab-me… NEST-Interactive: github.com/schwartzlab-me…

I am very excited to share our lab's first preprint Universitätsklinikum Heidelberg together with the Leuschner Lab. This study was led by @FloWuenne and Florian Sicklinger. biorxiv.org/cgi/content/sh…

I am incredibly happy to share that we have recently started the European Society for Spatial Biology (ESSB) European Society for Spatial Biology which will be hosting its first conference in Berlin 12-13 of December 2024: spatialbiologysociety.eu

Uh-oh 😬 KPC-luciferase-expressing cells elicit an anti-tumor immune response in a mouse model of #PancreaticCancer nature.com/articles/s4159… Not the only preclinical model where this has been been described by the way journals.plos.org/plosone/articl… nature.com/articles/s4159…

Quantitative biology folks - this conference is for you! Join us EMBL Events for the #QBMM conference in November. Stellar line up - 20 abstract selected talks. embl.org/about/info/cou… w Lacra Bintu Tineke Lenstra Savitski Lab Hartland Jackson

🧬🙌🏻 Only a week left to submit your abstract for 'Quantitative biology to molecular mechanisms' – over 20 talks will be selected from abstracts, with a priority for early stage researchers, so don't miss your chance! #EMBLOmics ➡️ s.embl.org/omx24-01 📜 Deadline: 27 Aug

Our latest paper is out in nature! Hair follicle stem cells activate phagocytosis to clear apoptotic neighbours and maintain homeostasis👇🏼 Shout-out to Katie Stewart and everyone involded for the great work 👏🏼 nature.com/articles/s4158…

We are hiring! Please RT The Lunenfeld-Tanenbaum Research Institute is seeking candidates for four (4!) positions for a Principal Investigator. lunenfeld.ca Applications close Oct. 20. Medicine by Design Temerty Medicine U of T Emerging and Pandemic Infections Consortium gingraslab Donnelly Centre uoftresearch

Using systematic approaches in biology?Have a cool story to present? We have extended the deadline for abstract submission for the QBMM meeting! We will select >20 talks from abstract, including junior researchers. Join us this November in Heidelberg EMBL. September 9th!

Two great opportunities in Toronto! apply.interfolio.com/152420