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We received the #UniImpresa funding from #UniPD and MarcoPolo Environmental Group for the #MICROBIOfuels project – with DICEA we will analyze a microbial inoculum with great potential for #biogas and #biohydrogen production improvement Department of Biology – University of Padova Laura Treu Gabriele Ghiotto

1/2 Our paper "A unified compendium of prokaryotic and viral genomes from over 300 #anaerobic #digestion #microbiomes" is out! Kudos to our research team for their hard work! …ronmentalmicrobiome.biomedcentral.com/articles/10.11… #Microbiome Department of Biology – University of Padova Laura Treu Guido Zampieri Esteban Orellana Gabriele Ghiotto

2/2 …and also to other present and past members of the Genomics and Bioinformatics research unit that gave a great contribution Maria Silvia Morlino Arianna Basile …ronmentalmicrobiome.biomedcentral.com/articles/10.11… Microbiome

Exciting news! The #sequencing facility just installed the Beckman i5 robot 🤖for NGS library prep! Many thanks to Department of Biology – University of Padova for the financial support through the "progetto di eccellenza" and a special shoutout to Claudia Del Vecchio for making this possible! #Sequencing

Our paper "FEEDS:Food wastE biopEptiDe claSsifier" is out! From microbial genomes to biopeptide function-supported by PRIN PROACTIVE project-Kudos to the brilliant minds behind it: @EdoardoBizzott1 Guido Zampieri,Victor Borin sciencedirect.com/science/articl… #food #waste #Bioinformatics

THE MICROBIAL RESOURCE MANAGEMENT The production of adapted microbial hydrogenotrophic consortia has begun, and a preliminary aliquots have been delivered to ELGO as an inoculum for the pilot reactor. Figure: Schematic workflow for microbial resource management of UNIPD.

Our paper is out in Chemical Engineering Journal "From Microbial Heterogeneity to Evolutionary Insights: A #Strain-Resolved #Metagenomic Study of H2S-Induced Changes in Anaerobic #Biofilms" sciencedirect.com/science/articl… - Huge thanks to the authors! #microbiology #anaerobic #digestion Department of Biology – University of Padova

WOW! Our paper is out! If you would like to know more on #bioaugmentation strategies based on bacterial and #methanogenic cultures to relieve stress in #anaerobic #digestion of #protein-rich substrates you can check it! sciencedirect.com/science/articl… Department of Biology – University of Padova Laura Treu Panagiotis Kougias

A new paper in collaboration with DTU-bioenergy is out! A #bioaugmentation strategy to recover #methane production in #sulfate-stressed conditions: focus on sulfate-reducing bacteria and #DIET-related species-thanks to Ginevra Giangeri Laura Treu Irini Angelidaki Department of Biology – University of Padova DTU

In our new review we describe the engineering approaches for enhancing the performances of #PET-degrading #enzymes – congratulations to all the authors, in particular to Alessandro Satta Department of Biology – University of Padova Laura Treu Guido Zampieri #Polyethylene #terephthalate link.springer.com/article/10.100…

Our tool for the functional prediction of #bioactive #peptides is out! CICERON predicts the functions of peptides of interest using #machine #learning - thanks to the authors, in particular to Edoardo Bizzotto - financial support by PRIN PROACTIVE sciencedirect.com/science/articl…

Maria Silvia Morlino presenting the last updates of the CooCE project at the 11th international conference on sustainable solid #waste management regarding the #bioconversion of #anaerobic digestion products to #biomass and #polyhydroxyalkanoates with Cupriavidus #necator

Very proud to present our projects on #CO2 methanation at the #48thFEBS congress in Milan! Thanks to the Italian Interuniversity consortium for biotechnologies CIB for this opportunity #biogas #CO2 #methane Department of Biology – University of Padova CRONUS HORIZON

Our paper is out in Bioresource Technology! We explored the autotrophic #PHA accumulation in C. #necator for sustainable #bioplastic production triggered by nutrient #starvation-kudos to all the authors Anna Santin Maria Silvia Morlino Laura Treu Tomas Morosinotto CooCE project Department of Biology – University of Padova

Interested in checking the presence of #microbial species in #metagenomic datasets? Check our new tool “Metapresence” just published in mSystems – thanks to all the authors davide_sanguineti_unipd davide_sanguineti_unipd Guido Zampieri Laura Treu Department of Biology – University of Padova doi.org/10.1128/msyste…

Our new #software MICROPHERRET leverages a suite of supervised #machine #learning algorithms to annotate microbial #genomes and #MAG in 86 #metabolic and other #ecological #functions @EdoardoBizzott1 soffifraulini Guido Zampieri Laura Treu Department of Biology – University of Padova …ronmentalmicrobiome.biomedcentral.com/articles/10.11…

New paper out! A huge effort for tracking #microbiome evolution in #biogas #reactors! Kudos to all the authors Davide Santinello Guido Zampieri Laura Treu and Fondazione Cariverona BTS Biogas for economical support Department of Biology – University of Padova sciencedirect.com/science/articl… #anaerobic #digestion #metagenomics

Overjoyed for our software in Genome Biology on advancing reconstruction of species-representative metabolic models from metagenome-assembled genomes 🎉 Kudos to Nicola De Bernardini stefano campanaro Guido Zampieri johannes zimmermann Silvio Waschina 🧬 Department of Biology – University of Padova 10.1186/s13059-024-03425-1

Pan-Draft introduces a new method for building metabolic models of microbes from incomplete genomes. This tool improves insights into uncultured microbial species, supporting research into ecological and industrial applications. #Metagenomics #GEM #10.1186/s13059-024-03425-1

Our paper is out in The ISME Journal! We used multi-omics and constraint-based #modelling to identify cross-feeding in a low-complexity #CO2-fixing #anaerobic #microbiota – congrats to the authors Guido Zampieri Laura Treu – LIFE CO2toCH4 Department of Biology – University of Padova doi.org/10.1093/ismejo…