Picking up where Rita Rebollo (ritarebollo.bsky.social) left, we spent a couple of years annotating and analyzing the rest of the rice #weevil #genome (ok, the 15% left after removing repeats)! All info presented here is on the huge Additional file 2 in @bmcbiology doi.org/10.1186/s12915… 1/n

Recently accepted in New Phyt 🌱 Epigenomic and structural events preclude recombination in Brassica napus Franz Boideau Gautier Richard Julie Ferreira de Carvalho Jean-Marc Aury Rousseau-Gueutin UMR Igepp ow.ly/AnZc50HVwj4

I'll start working in August as a permanent researcher 👨‍🔬 to study influenza A 🦠 and other viruses evolution 🧬 circulating in the pig 🐷 industry in Europe at the ANSES near the beautiful city of Saint-Brieuc next to the ocean 🌊🌞. Lovely bioinformatics analyses incoming 🖥️🥳

We are beyond excited that the {easystats} meta-package is on CRAN! 🥳 cran.r-project.org/web/packages/e… Now, to access functionality provided by all 10 📦s in this ecosystem, you need to do just this 🙌 ``` install.packages("easystats") library("easystats") ``` #rstats #DataScience

Cleaning #NCBI fasta headers be like: #Bioinformatics #bash #shell

Please RT! We're looking for a bioinformatician in our Boston office. This is a long-term industry role, so no grant writing or any of that other academia annoyance. More details and how to apply here: genedata.com/careers/open-p…

When you submit sequences to genbank, please, avoid typos. Thanks. Already took care of the numerous setement. Thanks to this, my sed-fu is becoming stellar though. #bioinformatics

We are hiring! Please RT! Nous recherchons un #postdoc en virologie🦠 pour rejoindre une équipe ultra sympa et dynamique basée à Saint-Brieuc🌊et travaillant autour de la #phylogeny et de l'intéraction #virus hôte de la Peste Porcine Africaine. anses.fr/fr/system/file…

A must-read to new parents (& not so new!) “A method to soothe and promote sleep in crying infants utilizing the transport response” cell.com/current-biolog…

Members of the INRAE REacTION_network met in La Rochelle for a writing retreat dedicated to DNA methylation in fungi, plants, insects, bacteria and protists. Thanks to INRAE Santé des Plantes et Environnement. With Fabrice Legeai, Gautier Richard, Nadia Ponts, Melanie Jubaut, Isabelle Fudal, Gael Le Trionnaire

Yesterday I had the opportunity to present my first results at the #ESFLU annual meeting.🧬 I presented phylogenetic analyses of swine influenza A viruses (#swIAV) in order to describe their infection dynamics in 2 pig herds over time🐷🦠 It was my first talk at a conference🗣️

🚨𝘼𝙡𝙚𝙧𝙩𝙚 𝙜𝙤𝙤𝙙𝙞𝙚𝙨 𝙎𝙁𝘽𝙄🚨 La SFBI (Société Française de #Bioinformatique) vient d'ouvrir sa boutique Tunetoo ! 🎉🧬 Mes visuels sont maintenant disponibles sur plein d'articles de la boutique 👀👕🧢 Rendez-vous vite sur le site: sfbi.tunetoo.com ! 🛍️✨

Discover our new publication in Emerging Infectious Diseases: Characterization of a reassortant Influenza D Virus (IDV)🦠 in swine from a mixed pig🐖-beef🐂 farm in France: wwwnc.cdc.gov/eid/article/30… The isolated IDV is a reassortant of the D/660 lineage with a D/OK Nucleoprotein

Discover our new preprint concerning a major change in swine🐖 #Influenza #virus🦠 diversity🧬 in France🇫🇷 owing to emergence and widespread dissemination of a newly introduced H1N2 1C genotype in 2020: biorxiv.org/content/10.110…

Alternating between even and odd ploidy levels switches on and off the recombination control, even near the centromeres (Franz Boideau, Virginie Huteau, et. al.) buff.ly/4cmFKRx Franz Boideau UMR Igepp Rousseau-Gueutin Jean-Marc Aury Gautier Richard ASPB #PlantSci