wf-human-variation is our all-in-one human variation workflow that consolidates small variant, structural variant calling and CNV calling, as well as STR expansion genotyping, in one simple solution Learn more: labs.epi2me.io/wfindex/#human… #ASHG23

It's time to look at sequencing differently. #ASHG23

At NCM 2023 Houston, we be hosting a data analysis workshop before the full conference! Learn about the EPI2ME workflows: from single-cell transcriptomics and human variation, to metagenomics and assembly. Learn more: bit.ly/45QdcN2 #nanoporeconf #ASHG23

Genome Research is now encouraging submissions for a Special Issue on Long-read DNA Sequencing Applications in Biology and Medicine, Guest Edited by AnaConesa, Alexander Hoischen, and Fritz Sedlazeck  bit.ly/grcallforpapers #longreads #T2T #LongTREC #Hitseq #ASHG23

Big RNA Dorado release [v0.4.3] - m6A DRACH-context mod model - poly(A) / poly(T) tail estimation - RNA read splitting - RNA adapter trimming Plus sample sheet support & significant memory reduction for duplex calling. github.com/nanoporetech/d…

Last up Matthew Parker on what’s going on in EPI2ME #nanoporeconf

You might have thought bed bugs was a very 2023 phenomenon.... wrong. Check out the new Oxford Nanopore tool "bed bugs" for the validation and generation of useful statistics from your bed files for adaptive sampling! tool: labs.epi2me.io/bed-bugs/ background: labs.epi2me.io/beg-bugs-intro/

Try #EPI2ME! With a beautiful interface there are many workflows available, developed by Oxford Nanopore and users!

Lots of new workflow features and updates in this months Oxford Nanopore #EPI2ME release. Highlights include Salmonella Serotyping in wf-bacterial-genomes for all your food safety needs, and a new CNV caller in wf-human-variation (Spectre Fritz Sedlazeck) and… labs.epi2me.io/epi2me-24.03-0…

We're making several Oxford Nanopore datasets available to coincide with #LC2024 #LondonCalling2024. They are available for download now from the #EPI2ME blog. These include; Zymo fecal reference, plasmids, lambda and E. coli and some human reference RNA! labs.epi2me.io/lc2024-datasets

We caught up with Dr Andre Holzer at #nanoporeconf to discuss how easy it is to analyse your sequencing data with #EPI2ME. You can hear more during his talk tomorrow.

From 13 to 13,000 publications in 10 years! London Calling Oxford Nanopore event is kicking off with lots of excitement. #nanoporeconf

BAM, FASTQ or POD5? Unsure about different nanopore file types? This question came up during the workshops yesterday and we thought it was a useful discussion for the rest of the Community to hear. For most applications BAM is the way to go. #nanoporeconf

Yup Chris Seymour and the rest of the Oxford Nanopore research and development team have really done something impressive here getting at the high end of 20s, >Q25 for quality scores (closing in on 1 in 1,000 errors in the raw reads). The "nanopore is high error" era is behind us though>>

"All you have to do is drag and drop the FASTQs and select the workflow" We caught up with Sarah Cameron at #nanoporeconf, where she told us how easy it is to analyse your nanopore sequencing data with #EPI2ME.

One order of magnitude more output from direct RNA sequencing using the latest chemistry! Inspiring talk by Laura White from University of Colorado at #nanoporeconf

What information can you get from Oxford Nanopore sequencing? Genomics, epigenomics and beyond! Great talk by Sissel Juul at #nanoporeconf

Introducing the MinION Mk1D. #nanoporeconf

Latest MinKNOW Update: • Alignment can be done while basecalling • RNA script and model updates • Support link directly from MinKNOW. • and more... Read here: bit.ly/4dyNpNn 1/4

We continue to commit to a unified EPI2ME experience. We've launched the #EPI2ME cloud enabling EPI2ME in the cloud or locally - data analysis for all. #nanoporeconf