SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/daewoooo/SVbyE…

TreeHub: a comprehensive dataset of phylogenetic trees nature.com/articles/s4159… 🧬🖥️🧪 github.com/wpwupingwp/tre…

🚨 new paper alert! science.org/doi/10.1126/sc… During my PhD, one of the most frustrating challenges was trying to interpret genes labeled as “hypothetical proteins.” 1/n

Identifying phage proteins that activate the bacterial innate immune system biorxiv.org/content/10.110… #biorxiv_micrbio

ProtGO: Universal Protein Function Prediction Utilizing Multi-Modal Gene Ontology Knowledge | Bioinformatics | Oxford Academic academic.oup.com/bioinformatics…

Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper nature.com/articles/s4158…

piqtree: A Python Package for Seamless Phylogenetic Inference with IQ-TREE | bioRxiv biorxiv.org/content/10.110…

Prophages block cell surface receptors to preserve their viral progeny | Nature nature.com/articles/s4158…

SSAlign: Ultrafast and Sensitive Protein Structure Search at Scale | bioRxiv biorxiv.org/content/10.110…

A dinoflagellate-infecting giant virus with a micron-length tail | bioRxiv biorxiv.org/content/10.110…

Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for next generation sequencing (pan)genome-resolved metagenomics and metatranscriptomics biorxiv.org/content/10.110…

The MicrobeAtlas database: Global trends and insights into Earth’s microbial ecosystems biorxiv.org/content/10.110…

Viromics approaches for the study of viral diversity and ecology in microbiomes | Nature Reviews Genetics nature.com/articles/s4157…

An Asgard archaeon from a modern analog of ancient microbial mats biorxiv.org/content/10.110… #biorxiv_micrbio

New online! Hunting archaeal viruses nature.com/articles/s4157…

Flourishing chemosynthetic life at the greatest depths of hadal trenches | Nature nature.com/articles/s4158…

Protein Structure Informed Bacteriophage Genome Annotation with Phold | bioRxiv biorxiv.org/content/10.110…

DPANN Archaea and CPR Bacteria: insights into early cellular evolution? royalsocietypublishing.org/doi/10.1098/rs…

A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package. #Microbiome #OmicsData #DataAnalysis #R Nature Protocols nature.com/articles/s4159…

New online! Clinical metagenomics for diagnosis and surveillance of viral pathogens nature.com/articles/s4157…