🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

Interested in clustering cytometry data with FlowSOM, but not so fond of R? Check out Artuur Couckuyt's paper on translating FlowSOM to Python here: academic.oup.com/bioinformatics…

🚨New paper published!🚨 We investigate 10 different quality metrics for attribution-based explanations on 8 image datasets, and use the results to propose a set of benchmarking guidelines. Read all about it here: doi.org/10.1007/s10994…

Proud to present our work at #SIAMIS24. We show that classical compressed sensing techniques can be used to obtain a defense against adversarial perturbations that is not only very efficient but also has nice interpretable robustness guarantees. 💻🎆🙌arxiv.org/abs/2405.15971

👇Our paper is now peer-reviewed and published in eLife - the journal! We've also added a new case study on a Visium dataset of mouse melanoma. 📄 Read here: elifesciences.org/articles/88431 💻 GitHub repo: github.com/saeyslab/spotl…

Our VIB hackathon on spatial omics has 🚀 liftoff 🚀 ! 37 researchers of 30 institutes from 12 countries, coming together 3 days to create new tools and methods. hackmd.io/@berombau/BJet… #flandersai #SpatialOmics24

Powering up for Day 2 of spatial omics hacking with our nice new VIB.AI coffee mugs #CoffeeToCode #SpatialOmics24 #FlandersAI

We celebrate the end of our three-day 🚀hackathon🚀 on spatial omics tools and methods in #Ghent #Belgium. A big thanks to all of the researchers across Europe. Check out our final slide deck and code! docs.google.com/presentation/d… github.com/saeyslab/VIB_H… #SpatialOmics24

Lotte Pollaris presenting the Sparrow pipeline. Fantastic collaboration between SaeysLab, Charlotte Scott and our lab. Automated analysis of spatial omics data. How to annotate cells & correct for imaging artefacts. Fantastic presentation by this super talented PhD student 🤩🤩🤩👏🏻👏🏻

Honored to have received a CZI grant for further developing the cell-cell communication models of the future, together with "the other" Saez-Rodriguez Group 😀 Really looking forward to this one ! SaeysLab Chan Zuckerberg Initiative

What does the future of spatial omics data processing pipelines look like ? Meet Sparrow, our new human-in-the-loop interactive pipeline that facilitates better quality control, improves segmentation and leads to better downstream analysis Lotte Pollaris biorxiv.org/content/10.110…

Final day of our SaeysLab conference! 👨‍🏫 Fascinating week where each subteam got to share their expertise with the other lab members: from cytometry over scRNA-seq to spatial omics. The machine learning team will top it all off with explainable AI and dimensionality reduction 🍰

It's happening again! 🤩 Join us for a hands-on program designed for those interested in advancing their skills in computational cytometry data analysis. Find the program and apply here: t.ly/49QQe #CompCyto2025 🙏 to our sponsors Sony Biotechnology and BD Biosciences

We are thrilled to announce that SaeysLab is now officially a member of the EuroFlow Consortium! Through this collaboration, we will contribute to standardization of clinical cytometry workflows and data analysis (because we love consistent, accurate and reproducible results 😉).

Only 2 weeks left! ⏰ Don't hesitate and apply now for our Computational Cytometry Summer School if you want to know more about quality control, batch effect correction, clustering and statistical analysis of cytometry data 💡 Link below ⬇️