Having a great time at IITM-EBI winter school on reproducible modelling bit.ly/3y2AmjO, I am co-organizing with Karthik Raman. On the last day (9th Dec), we have an open keynote lecture from James A. Glazier via Zoom, also as part of 9th IBSE colloquium IIT Madras

Shoutout to Suruchi Bakshi for setting great example to promote model #reproducibility. While curating her model we found a couple of mistakes in the manuscript. When reported, she not just clarified, but also went on to publish a correction of manuscript ebi.ac.uk/biomodels/BIOM…

Do you use or intend to use spatial multi-cellular models in your research? If yes, please complete this short survey docs.google.com/forms/d/e/1FAI… We propose to support curation, discoverability, reproducibility & archiving of multicellular spatial models of tissues in BioModels.

Let’s us work together as a community to improve reproducibility and curation of constraint-based models using #FROG community standard.

Job opening for Bioinformatician (Pandemic Preparedness) position at EMBL-EBI. More details here embl.org/jobs/position/…

Our paper on human immune digital twin is out. This is a first step towards a grand vision we are working towards!!! nature.com/articles/s4174…

We encoded 24 covid19 transmission models in highly interoperable SBML SBML using @COPASI_software as proof of concept. We discuss in our manuscript the advantage of using systems biology community standard to encode COVID19 models.

Just one week left. Apply Soon. Get hands-on experience to use several systems biology modelling tools and listen to lectures from experts in academia and the pharmaceutical industry. This beginners course is open to experimental biologists, bioinformaticians and mathematicians.

📣Calling all early-career researchers who develop systems biology models! Our biomodels colleagues have launched the first edition of their ‘Model of the year’ competition. Check out the entry requirements and submit yours for a chance to win! 🏆 ebi.ac.uk/about/news/upd…

The deadline extended until 20th Jan 2023 to accommodate requests from our users and collaborators. Don't miss the opportunity to submit your application to enter the Model of the year 2023 competition!!!

Did you know that you can easily find, access and reuse, interoperable #systemsbiology models biomodels? Join our #bioinformatics #webinar next week to find out more. Registration free but essential - ebi.ac.uk/training/event… #mathematicalmodeling #computationalbiology

Did you know that you can not only submit models you authored but also curate published models and submit them to BioModels? Pedro Mendes @gepasi curated and submitted the vonDassow2000 model ebi.ac.uk/biomodels/MODE… Community curation is a great way to enhance public resources!

A free public collection of #ArtificialIntelligence #machinelearning #models will greatly advance life science and medicine! With this grand vision in mind, we started our pilot effort to make AIML models #FAIR and #reproducible by extending biomodels! biorxiv.org/content/10.110…

ALERT! ELIXIR Machine Learning Focus Group & others are seeking industrial and academic partnerships for the following call: "Maximising the potential of #SyntheticData generation in healthcare applications" shorturl.at/fJSV0. Reach out to us if you are interested!

We are organizing the virtual EMBL-EBI Training course Mathematics of Life 2024 Join us for an introduction and hands-on training on modelling approaches, tools, and resources used in #systemsbiology Deadline: 26 November ebi.ac.uk/training/event…

We were excited to announce the winners of the #modeloftheyear2023 competition at @icsb2023 Hartford, CT. Congratulations to the winners! A big shout-out to all participants who submitted their interesting models! Application for #MOY2024 is open! ebi.ac.uk/biomodels/comp…

🚀 Launching "Poincaré & SimBio": Pure Python packages for modeling dynamic system 🔥Easy Python integration & extension 🔥SBML support 🔥Numba JIT compilation 4 top performance 🔥Python syntax for IDE-based error-detection, code analysis & refactoring 🔗 doi.org/10.1101/2024.0…

🌟 Our article on the Model of the Year 2023 is out! Check out the winners' innovative work in #FrontiersinSystemsBiology: doi.org/10.3389/fsysb.… 🏆 Dreaming of having your model in the spotlight? ☀️ Apply now for MOY2024 ebi.ac.uk/biomodels/comp… ⌛️Deadline: 29th Feb 2024!

Join Us for the remote BioModels ML Hackathon – June 20-21, 2024 dedicated to making machine learning models in life sciences FAIR and reproducible. Registration: tinyurl.com/FAIR-AIML-2024

FROG analysis is an impactful advancement for improving reproducibility and reliability in the rapidly growing field of GEM modelling. Proud to share this exciting work after a 3-year journey. A huge thank you to all core team members and contributors! doi.org/10.1101/2024.0…