Public Health Alliance for Genomic Epidemiology
@pha4ge
Seq data of varying quality can be used for different public health applications (analysis, training, more). Public Health Alliance for Genomic Epidemiology standardized QC tags help users share, triage, and identify a wider array of data in public repos. For more info, see: shorturl.at/1yaCw hot off the presses!
Emma Griffiths Public Health Alliance for Genomic Epidemiology I think part of the origin story for this was my whatdowedo? 🤷🏻♀️ question on twitter… which the fab folks Public Health Alliance for Genomic Epidemiology actually came up with answers to, & eventually encouraged me to join them in their wonderful Data Structures group 🧬👩🏻💻 Congrats Emma Griffiths Ruth E. Timme & co 🙌🙏
Congratulations to Public Health Alliance for Genomic Epidemiology Data Structures Working Group on their published paper describing standardised tags to flag poor-quality genomic datasets, enhancing discoverability & reproducibility🥳 Link to publication: microbiologyresearch.org/content/journa…
Day2 sysadmin curriculum development. Experiences shared across diverse research and #PublicHealth ecosystems. 1) sysadmin critical to support datascience, 2) funding models do not sustain sysadmin skills retention. Public Health Alliance for Genomic Epidemiology Africa CDC
🚨 World Health Organization (WHO) has declared the #mpox outbreak a Public Health Emergency of International Concern. To support public health labs, the @PHA4GE PipeViz WG created a living document on key challenges & open-source tools for #mpox analysis. #genomics #publichealth pha4ge.org/resource/bioin…
Expanding mpox testing and sequencing should be prioritized and accelerated. We are leveraging and building on #AfriacPGI partnerships, national and regional capacities, collaborations, systems, and networks. #AfricaCDC Gates Foundation Illumina EU HERA Pathogen Genomic Lab - INRB
From Science Magazine: “We believe that building trust through transparency is essential for encouraging broader participation in data sharing,” says Pathoplexus co-founder Anderson Fernandes de Brito Anderson F. Brito science.org/content/articl… #Pathoplexus #OpenScience
Pathoplexus has been a community effort from the start - we're so pleased to work closely with Public Health Alliance for Genomic Epidemiology to ensure we have diverse representation & expertise in areas like data standards, pipelines, and ethics - drawn on for every part of Pathoplexus. 🔄🖥️⚖️ 5/9
Check out our latest blog from Dr. Inês Mendes and Dr. Bryan A. Wee, members of the Public Health Alliance for Genomic Epidemiology Public Health Alliance for Genomic Epidemiology . They show how ‘bad data’ can be made more valuable by tagging them with information about their potential issues. microb.io/3Xrg9kH