Rappel pour nos amis chercheurs et étudiants : il est INTERDIT d'utiliser ce site qui permet d'accéder à tous les articles de recherche gratuitement ! Ce site est souvent bloqué par les fournisseurs internet, il est aussi interdit de contourner le blocage avec cette méthode. 🧵

Congratulations tom delmont et al nature.com/articles/s4158…

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Using PAML to detect positive selection but need some guidance? Paschalia Kapli , Ziheng Yang's Group , and I have been working on a protocol that we hope you find useful. The "Beginner's Guide on the Use of PAML to Detect Positive Selection" is now available! academic.oup.com/mbe/article/40… (1/n)

The wonders of population genetics allow us to reveal the echoes of the tumultuous times our ancestors survived, forever imprinted in our genome. In this thread, I'll share my experience replicating one of my all-time favourite papers by Heng Li and Richard Durbin

This paper on deep dinosaur divergences gets at the key issue facing morphological phylogenetics right now: big datasets generate equivocal support for just about every credible hypothesis. We need higher quality data and methodological refinement nature.com/articles/s4159…

In our new study, we challenge this notion and show that for deep divergences DNA based tree inference is of similar accuracy to AA inferences 😱😱😱

📢 ATTENTION #PlantSci Community 🌱 🌾 🌽 📢 Peer Community In seeks to initiate a new "PCI Plant Sciences" to redefine #PeerReview & 💎 #OpenAccess in the field! Sign up to contribute to support a transparent, equitable & inclusive publishing ecology: buff.ly/3D3GefS

Very happy to announce the publication of our new SV genotyping tool for long read data: SVJedi-graph. Congrats to Sandra Romain for her first PhD student paper ! Come meet us and see Sandra present the method and its results at #ISMBECCB2023 #HiTSeq doi.org/10.1093/bioinf… 1/3

Now published in Peer Community Journal, Mathematical and #Computationalbiology section: An approximate likelihood method reveals ancient gene flow between human, chimpanzee and gorilla doi.org/10.24072/pcjou…

Worm Weds!🪱New preprint- The story of clitellate annelid genome evolution (earthworms, leeches) We found that they have extensive genome rearrangements, raising questions about how their gene regulation and development differs from other animals biorxiv.org/content/10.110… 1/10🧵

Interested in phylogenomics and plants ? We are still looking for candidates for a PhD thesis proposal at the University of Rennes about "Structural dynamics of plant genomes: Evolution of synteny in the context of polyploidy". t.ly/3gPDm Contact us for more info !

MAST: Phylogenetic Inference with Mixtures Across Sites and Trees academic.oup.com/sysbio/advance… Society of Systematic Biologists

Do grant proposal texts matter for funding decisions? A field experiment Spoiler alert...NO! #Grants #academia

The value of ‘wasting time’ on deep thinking is often overlooked in a scientific ecosystem increasingly tainted by Wall Street’s productivity mindset. nature.com/articles/d4158…

Pretty strong evidence of negative mental health effects of doing a PhD. Recent working paper by Eva Ranehill, Anna Sandberg, Sanna Bergvall, and Clara Fernström. Paper link: swopec.hhs.se/lunewp/abs/lun…

NEW Publication!!😄 Phylogenomic analysis of Opisthokonta (#animals, #fungi, & relatives) reveals a largely robust #phylogeny, but uncovers orthology inference methods as a major contributor of #incongruence. This study provides a robust framework for studying the #Opisthokonts

How #training and #education are crucial for #biodiversity protection. Read the article on Nature.com 👀 cetaf.org/elementor-1084… #taxonomy #BiodiversityMatters

Exploring gene duplications! Our study reveals how duplicated genes diverge in function using structural and expression analysis across 36 species. Check out our paper: biorxiv.org/content/10.110… Thanks to Alex WV, Natasha Glover, Paul Thomas, Christophe Dessimoz #Genomics #Evolution

My entire team wrote an opinion paper about Common misconceptions of speciation research. Each section is written by 1-2 team members. The bulk of the writing happened during two writing retreats. It was a lot of fun and I am very happy with the result. academic.oup.com/evolinnean/art…