“What is the co-translational function of chaperone SecB?” This is the question we and Bukau Lab tried to answer in Cell Reports cell.com/action/showPdf… by combining spatial proteomics, interactomics and membrane translatomics (MAR-seq) techniques with selective Ribo-seq.

New preprint of Simon Stael, Frank Van Breusegem Lab and many others on the structure-function analysis of a calcium-independent metacaspase, which reveals a novel proteolytic pathway for lateral root emergence: biorxiv.org/content/10.110…

When @PSB_VIB goes to a meeting … 3/6 poster prizes .. two first places .. well done #inppo2023 VIB UGent

Wonderful experience to present our work Patrick Willems and win poster prize with Siel Goethals and Sylwia Struk in #inppo2023 #thessinppo! Look forward to the next meeting organized by Dr. Jennifer Geddes-McAlister in Canada!

Happy to participate in ThessINPPO2023 and meet old/new friends Hongtao Zhang Jingjing Huang Siel Goethals Ive De Smet NaomiStuer Sylwia Struk! #inppo2023

Which DIA data-analysis workflow should you use? Check our paper! An Staes Kris Gevaert CompOmics Robbin Bouwmeester Ralf Gabriels Sara Dufour Teresa Maia

Happy to present CysQuant, a proteomics method to determine the degree of cysteine oxidation + protein levels using light/heavy IAM, compatible with DDA and DIA-MS. biorxiv.org/content/10.110… Many thanks to all co-authors! Jingjing Huang Kris Gevaert Frank Van Breusegem Lab Vadim Demichev

Interested in quantifying the degree of cysteine oxidation, while monitoring protein level changes? Here's our DDA and DIA approach: sciencedirect.com/science/articl…. With Jingjing Huang, Anneli Åkesson, VIB Proteomics Core , Vadim Demichev, Frank Van Breusegem Lab and Patrick Willems.

All I want for Christmas is a new Postdoc🎶🎄. Come join this fantastic team in Uppsala to work on protein engineering and plant-insect interaction! Please RT! #ERC_research SLU Plant Protection Network #plantscijobs More info and application via the link slu.se/en/about-slu/w…

Jingjing Huang with the newest and most advanced system for profiling cysteine oxidation. Great updates on the light-induced changes in the cysteine oxidation profiles 🌱 Frank Van Breusegem Lab Yosef Fichman #POG2024

Patrick Willems is confirming to us the power of single cell sequencing to decode oxidative stress signalling with tissue resolution 🌱 #POG2024

Check out our updated version of Plant PTM Viewer — the coolest resource website for PTM searches in plant proteins! Patrick Willems Kris Gevaert Ive De Smet Avilien Dard Frank Van Breusegem Lab

Great oppotunity to share our work at #PlantBio2024 and #ASPB Hawaii🌸! Huge thanks to Patrick Willems An Staes Impens Lab Vadim Demichev Frank Van Breusegem Lab Kris Gevaert Yosef Fichman and Ron Mittler for their contributions. Together, let's keep CysQuant rocking and rolling!🚀

Are you using mass spec based proteomics to study endogenous proteolytic activity? This work describes an R package TermineR for downstream processing (annotation, visualization, differential analysis etc.) of semi-specific search results from #FragPipe. …iencejournals.onlinelibrary.wiley.com/doi/10.1002/pm…

Excited to share our latest MCP article uncovering > 6,000 MHC class I immunopeptides in Listeria-infected mice, including 12 Listeria peptides and a potent CD8+ T cell epitope. Many thanks to all co-authors for the excellent work! Read more at doi.org/10.1016/j.mcpr…

Happy to share our immunopeptidomics pipeline using four search engine with follow-up rescoring to boost confident IDs. Also applied to timsTOF SCP data! Impens Lab CompOmics Preprint: biorxiv.org/content/10.110…

🚀 Boosting bacterial immunopeptide discovery! Our bioinformatics workflow integrates 4 search engines with follow-up rescoring to enhance ID by 27%, maximizing the discovery of vaccine candidates. Applied to timsTOF/Thermo data🦠💉 Impens Lab 🔗Read: pubs.acs.org/doi/full/10.10…

What started as a 'funky' observation back in 2017 while visiting the lab of Alex Costa and after skilfull execution of Dominic Kuang, Shanna Romand, and many more, now found a home in Current Biology. sciencedirect.com/science/articl…

Just finished an amazing week at the Summer School on Vaccinology at UAntwerpen As a molecular biology bioinformatician I learned a ton about vaccines from a public health perspective and met brilliant people from around the world. Big thanks to the organizers! 💉🧠🌍