Aaand... start! The 2024 CENTURI Hackathon is on! Following a presentation from project owners, 50 participants will tackle challenging topics on #ComputerVision, #Modeling, #datamining and Computer assisted microscopy. Guignard Lab Philippe Roudot #CENTURIHACK2024

Having a blast at the Centuri hackathon in Marseille. Day 2 of cell segmentation, tracking and 4D registration!#CENTURIHACK2024 with Le Duong Quoc Thang Cheng-Yu (Kou) Huang and more! Guignard Lab Philippe Roudot CENTURI - Turing Centre for Living Systems Michael Sars Centre

Introducing Microtutor LIVE! Work through a Microtutor imaging course on your own schedule & meet with instructors virtually for Q&A. 1st course on Fluorescence Microscopy is scheduled for the fall! FREE & open to all! More info & apply at tinyurl.com/microtutorlive… #microtutor

Just arrived in #SunnyBergen for a 2-day visit at Michael Sars Centre. Thanks you @lionlchristiaen for the invitation! Looking forward to nice discussions on marine #devbio and lovely ascidians.

Take a look at our Spatial Transcriptomics and single-cell Multiomics papers. We visualize more than 20,000 genes and 200,000 accessible chromatin regions in whole embryos. x.com/biorxiv_devbio… x.com/biorxiv_devbio….

Science is built on trust. What happens when someone destroys it? My first feature for The Transmitter investigates the emotional and existential fallout for one lab in the aftermath of a misconduct case. thetransmitter.org/science-and-so…

⭐ Join the CellMap Segmentation Challenge! ⭐ Compete to create the next, best #AI-driven image segmentation model using hundreds of our meticulously annotated high-resolution EM images as training data. Competition starts end of Oct. Sign up today ➡️ cellmapchallenge.janelia.org

Congratulations to Paula Miramón-Puértolas @miramon_paula, Eudald Pascual & @PRHSteinmetz for a new paper just out in Nature Communications 🤩 The team's beautiful work identifies a cell population giving rise to both germline and neurons in #Nematostella ⤵️ tinyurl.com/3eu556mu Universitetet i Bergen

We are thrilled to share that our first paper from my new lab, Spateo (github.com/aristoteleo/sp…) for spatiotemporal modeling of molecular holograms, is now online in Cell: cell.com/cell/fulltext/…. Spateo is a comprehensive analytical framework for 3D whole-embryo spatiotemporal

Here is the link to video of introduction course Collège de France on biological information. A historical perspective on representations of the genome, highlighting contributions of von Neumann, Jacob&Monod, Waddington, Alberch etc. Video (french)+pdf (english): tinyurl.com/y4k44cd4

Find me at #CBIAS2024 in London! Come to chat about image-to-single-cell morphology and how morphosnaker 🧊🐍🧊 can help. Also come to play around with our virtual embryo. #morphosnaker #singlecell #morphology Crick BioImage Analysis Symposium

Excited to share this (literally small) chapter out today! 🎉 We detail how we studied cell death in planarians, with protocols for TUNEL, caspase-3 assays, and bak qPCR📜 link.springer.com/protocol/10.10…

I’m delighted to share that I will be starting my lab University of Miami in Spring 2025! We will study cellular and developmental biology in non-bilaterian animals – cnidarians, ctenophores, placozoans, and sponges – to explore early animal evolution.

Tickets are ON SALE NOW for the Open Hardware Summit 2025 in Edinburgh, Scotland! Get your ticket today right here: ohs2025.eventbrite.com

Application still opened for an exciting PhD project at CENTURI - Turing Centre for Living Systems with Claudio Collinet that combines AI and Stochastic Modeling to understand how living embryos rearrange their own shape! Project details and application form here: centuri-livingsystems.org/application-fo…. DL January 27th.

Search is changing, using LLMs to reliably query your own data and public data bases will become the norm. Amongst other tools we use LangChain to drastically reduce hallucinations of LLMs.

We are excited to announce that registration for the Michael Sars Symposium 2025 is now open! 🤩 Join us on June 6th at Media City Bergen for a day of exceptional talks! Registration link in the comments ⤵️ #MSS2025

So happy to finally share my postdoctoral work!! 🥳 Check it out!

Happy to announce that my book « Cells - The Illustrated Story of Life » is in press and can be pre-ordered on the site of the New York publisher « The Experiment » theexperimentpublishing.com/catalogs/fall-…

The epitranscriptome formed by the growing number of modifications occurring within mRNA transcripts.