
Matt Pennell
@mwpen
Associate Professor of Quantitative + Computational Biology @USC. Using phylogenetics to answer questions in evolutionary biology, epidemiology, and immunology.
ID: 1281066555883745281
http://mwpennell.ca 09-07-2020 03:24:28
994 Tweet
1,1K Followers
604 Following

Now accepting applicants for our PhD program in computational biology and bioinformatics USC Dept. of Quantitative & Computational Biology qcb-dornsife.usc.edu/phd we have a great group of faculty who care a lot about the program and are committed to providing world-class training. Deadline is Dec. 15.

New paper: GreiffLab 💻🔬💊 Corey Watson Oscar R. and I pull together a bunch of evidence to try and understand what germline IG variation is doing and how it’s maintained. Have more Qs than As but hopefully point folks toward cool problems. sciencedirect.com/science/articl…

Our perspective piece on evolutionary aspects of immunoglobulin germline variation is out sciencedirect.com/science/articl…. Incredible collaboration with Matt Pennell and Corey Watson.




took me 3 years after I learned about O-1 from Patrick Collison bc I was dumb and clueless. if followed advice of José Luis Ricón Fernández de la Puente (nintil.com/us-immigration) and had support from Lisa Wehden & Minn (lisa-wehden.medium.com/a-guide-to-app…), could've done it 2x faster youtu.be/-KoXt9pZLGM


With the release of iReceptor Gateway v4.0 (x.com/ireceptorgw/st…) all iReceptor airr_community #AIRRDataCommons repositories are now using https as a protocol. If you are accessing the #AIRRDataCommons using the #ADCAPI then your queries will have to take this into account!



FUSION ENERGY BREAKTHROUGH: US scientists have made one of the most significant leaps in decades in the search for the Holy Grail of energy - limitless, carbon free power - by achieving net energy gain in a fusion reaction ft.com/content/4b6f0f… Huge scoop by Tom Wilson

Check out our paper showing how IGHV1-69 polymorphisms can affect SARS-CoV-2 antibody functions. Amazing supervision from Karlsson Hedestam Lab Martin Corcoran. Great collaboration with Ben Murrell Daniel Sheward @das_hrishikesh1 Martin Hällberg out Immunity cell.com/immunity/fullt…


Here are Holiday Season Gifts as open calls for #RECOMB2023 @RECOMBSeq: recomb-seq.github.io/papers/ RECOMB-CCB: recomb2023.bilkent.edu.tr/recombccb.html RECOMB-CG: recomb-cg.org/submit.php RECOMB-Genetics: recomb2023.bilkent.edu.tr/recombgenetics… Highlights: recomb2023.bilkent.edu.tr/call_for_highl… Posters: recomb2023.bilkent.edu.tr/call_for_abstr…

I wanted to share on here a preprint from last month, a collaboration between my lab and Rori Rohlfs' lab, led by Vivian Link and Yuómi. We consider a set of genetic loci used in forensics in the US and other places, the CODIS markers (1/n) biorxiv.org/content/10.110…

The latest from Matt Pennell explains that multiple models of mut can generate the same M matrix, and they explore implications of this for long-term divergence biorxiv.org/content/10.110…