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Our paper on GPU accelerated Smith-Waterman algorithm for Protein and DNA sequence alignments is now available: rdcu.be/b7fhY. Currently it only works on #NVIDIA GPUs, a HIP port for #AMD GPUs is coming soon!

🚨 In our new blog series, NERSC engineers will be sharing insider details about how the facility is preparing for Perlmutter 🚨 First up: Jack Deslippe ( @jdeslip ) & Doug Jacobsen give a peek at the system's new GPU processors bit.ly/PerlmutterGPU U.S. Department of Energy DOE Office of Science #HPC

ExaBiome project (sites.google.com/lbl.gov/exabio…) is looking for a postdoctoral fellow to work at Berkeley Lab Computing Sciences Area. The postdoc will design parallel algorithms for bioinformatics, machine learning, or graph analytics, and implement them on GPUs and clusters with GPUs: m.rfer.us/LBLfh93Tf

Did you know that NERSC hosts a number of paid internships every summer for students? See all of our open positions: bit.ly/NERSCintern21 cc: Berkeley Lab K-12 Program Berkeley Lab Berkeley Lab Computing Sciences Area DOE Office of Science U.S. Department of Energy #HPC #AI #ML

DYK #Perlmutter will quadruple the computational power currently NERSC? The HPE Cray EX supercomputer—containing NVIDIA A100 Tensor Core GPUs + 3rd Gen AMD EPYC CPUs— will be among the world's fastest for simulation, analysis, and #AI. More: bit.ly/PRPerlmutter | #HPC

Perlmutter at NERSC/LBNL at No 5 is highest ranked new system It also is #3 on HCG, #4 on HPL-AI and #6 on the Green500!

Have questions about science, supercomputers, and our new Perlmutter system? Experts Richard Gerber Dr. Rebecca Hartman-Baker @[email protected] @jdeslip_hpc Glenn K. Lockwood & @dch3njw have answers! Join our Twitter chat w/HPE Cray NERSC & NVIDIA HPC Developer July 1 at 9am PT. #AskPerlmutter #ISC21 Berkeley Lab #HPC

This is an excellent opportunity for recent PhDs in computing to jump start their research careers. Alvarez alumni continue their research as faculty in academia (e,g., MIT, Berkeley, Penn State, Notre Dame), and as scientists at government and industry labs. Please RT

What a victory! Complete domination! #PakVsInd #KingBabar #T20WorldCup

Join me for our best paper award nominee talk on Tuesday! #SC21 #GPU #Bioinformatics #HPC

Both the Readers and Editors agree that the "Top #Supercomputing Achievement" HPCwire award should go to the #Perlmutter #supercomputer NERSC! Congratulations to all the folks Berkeley Lab , NERSC, HPE Cray, AMD & NVIDIA who worked on this! #SC21 #HPC #AI

… and we are awarded the Gordon Bell Prize for #COVID! Another accolade for #Fugaku

Don't miss Kathy Yelick's seminar on Genomic Analysis at Scale—registration needed (see below) ;)

Exciting work by Oguz, Aydın Buluç and team! Proud to have been a part of this. All the best for the finale!

This is fabulous! Honored to be part of winning team for Gordon Bell Special Prize for COVID-19 research at #SC22 The first genome language models to predict variants of concern Arvind Ramanathan (he/him) Weili Nie Yuntian Deng Arash Vahdat ✈️ ICML2025 Chaowei Xiao Christian Dallago NVIDIA @caltech ALCF

Congrats 🎉 Berkeley Lab's Jean-Luc Vay, Axel is elsewhere & Exascale Computing Project's Warp-X team on winning Association for Computing Machinery's Gordon Bell prize! About their work: bit.ly/GBFinalists Podcast about #HPC contributions: bit.ly/WarpXecp LBNL Accelerator Technology & Applied Physics NERSC OLCF DOE Office of Science CEA

ExaBiome Berkeley Lab Computing Sciences Area representatives at #SC22 during the Award Ceremony!

End of an era: After 7 years of service, thousands of user projects & billions of compute hours, NERSC’s Cori supercomputer will be officially retired on May 31. Thank you for a great run! ow.ly/lzk450Oqkbf Berkeley Lab DOE Office of Science HPE Cray #HPC