📸Thanks to this week's #microscopy and #machinelearning course participants! Virginie Uhlmann, Craig Russell, Jason Swedlow, Petr Walczysko, Estibaliz Gómez de Mariscal, PhD, @guijacquemet, Martin Weigert (maweigert.bsky.social), Soham Mandal, Awais Athar, @weioyang, Simone Weyand, Beth Cimini 🔬💻 📊, Rebecca Senft, Barbara Diaz & more!

Together with the wonderful collaborators and community partners, we are happy to finally present the BioImage Model Zoo at bioimage.io, now described in biorxiv.org/content/10.110….

For users and developers of deep learning models in microscopy, we hope to have built a home where such models can be shared and discovered to be run in our desktop and cloud tools. Try it out, give us feedback, join the community!

With all the people tagged above + Martin Weigert (maweigert.bsky.social), @guijacquemet, Pete Bankhead, Tom Burke, Lucia Moya-Sans, Cristina de-la-Torre-Gutiérrez, Deborah Schmidt, Maksim Novikov and Dominik Kutra.

🙋Hands up if you enjoyed a week of EMBL-EBI training! Thank you to all the organisers, trainers, and trainees that joined us & ENLIGHT-TEN+ for this week's training course on T-Cell immunology. 🔗Further your #bioinformatics knowledge with EMBL-EBI Training: ebi.ac.uk/training/live-…

🚨💻🔬🤩 #SoftwareEngineers Assemble!! Looking for 2 #DeepLearning #BioImageAnalysis developers for the #AI4LIFE project. Projects follow the ethos of #ZeroCostDL4Mic, democratizing free access to next-generation imaging technology. Come join us! euraxess.ec.europa.eu/jobs/835624

Big congrats to Virginie Uhlmann for being appointed as our Deputy Head of Research! 🎉 Virginie will support the coordination of our research groups, while continuing to lead her own group focusing on bioimage analysis. ebi.ac.uk/about/news/ann…

If it's #microscopy training you're looking for, sign up for alerts on our 2023 course featuring EMDB - EMPIAR @EBI as well as the @BioImageA. Applications open next week. Run in association with EOSC-Life. ➡️ebi.ac.uk/training/event…

🚨Job Alert 🚨 We are looking for a #BioimageAnalyst and/or #RSE to join our growing image analysis facility here at Human Technopole in the beautiful city of Milan, Italy. #Apply before December 16! forum.image.sc/t/job-opportun…

Applications for our #microscopy virtual course, focusing on #machinelearning and the BioImage Archive close this Sunday. Submit yours now: ebi.ac.uk/training/event… Run in association with EOSC-Life Funding available* from BioImaging North America *T&Cs apply.

We are #hiring PhD students and Postdocs in #AI, #deeplearning #computationalbiology, #bioimaging, #robotics and #wholecellmodeling I recently joined KTH Royal Institute of Technology as an assistant professor and starting a new research group ( AICell Lab: aicell.io) at SciLifeLab

And now comes the hands-on session! How to look for a model in BioImage.IO to segment Bacillus Subtilis bacteria? Can the model be downloaded and run? Estibaliz Gómez de Mariscal, PhD teaches all this and more!

Dominik Kutra from ilastik Team and Anna Kreshuk's Lab help trainees with #ImageSegmentation in ilastik, explore and discover the tools in the BioImage.IO 🦒 and run the model zoo models in ilastik.

Estibaliz Gómez de Mariscal, PhD takes over from Dominik to perform #DeepLearning boosted instance #NucleiSegmentation with deepImageJ and run superresolution models in Fiji, all of them available in BioImage.IO 🦒

A special thanks to EOSC-Life for the support given for the organisation of the 'Microscopy data analysis: machine learning and the BioImage Archive' EMBL-EBI Training course, along with #BINASupport to our amazing delegates from BioImaging North America. One more day to go!!

Day 5... Distributed/Cloud computing, and Advanced topics (Terminal, Snakemake, pyTorch)! Jean Marie Burel, Petr Walczysko and Craig Russell join us on the last day of the 'Microscopy data analysis: machine learning and the BioImage Archive' EMBL-EBI Training course. Thank you all!!

Looking for an engaging Friday read? Check out the comprehensive report by Estibaliz Gómez de Mariscal, PhD in FocalPlane, highlighting AI4Life's active participation at the 5th NEUBIAS Conference: focalplane.biologists.com/2023/05/26/ai4…

This year, the BioImage Computing (#BIC) workshop will go down at ICCV in Paris! 🥐 Submit your work between June 21st and July 21st and join us at ICCV! Check out the preliminary program: bioimagecomputing.com/program/

We discovered a surprisingly easy way to control the brightness of fluorescent proteins via magnetic fields: andrewgyork.github.io/gfp_magnetoflu… This raises fascinating scientific questions about the mechanism, and tantalizing technological opportunities for bioengineering.

Get ready for a game-changing development! AI4Life and Leica Microsystems have joined forces to integrate #DeepLearning models from BioImage.IO into Aivia Software. Industry-academia teamwork in action! 🔬🚀 ai4life.eurobioimaging.eu/ai4life-leica-…