Excited to share our review of TCR sequencing technologies out now in Nature Methods! nature.com/articles/s4159…

Happy to share recent work from Katalin Danielne Sandor Joy Pai Bence Daniel in collaboration with the Egawa lab Takeshi Egawa identifying a TCF1+ CD4 progenitor that maintains long term responses to chronic antigen

New preprint!!! Here we show how transient activation of dendritic cells diversifies T cell fates. A thread in english y también en español! biorxiv.org/content/10.110…

Very excited to share our work on regional T cell clonal dynamics in lung cancer! Honored to be able to work with and learn from Andrew Chow, Matthew Hellmann, Ansu Satpathy, Charlie Rudin, Taha, Jedd Wolchok, and many more.

Are you or someone you know applying to Stanford Immunology's PhD program this fall? Join SIRPA to get Statement of Purpose feedback and a 1-1 session with a current Stanford Immunology PhD student! First-come first-served until November 5th.

Excited to share our preprint on clonal T cell differentiation trajectories of T cell exhaustion. Great collaboration with Katie Yost Howard Chang Takeshi Egawa Ansu Satpathy and others Stanford Medicine. biorxiv.org/content/10.110…

Check out this amazing work on the epigenetic programming of TRMs, led by my lab-mate and friend @buquicchioli!

Our lab thinks a lot about the epigenetic regulation of T cell exhaustion. Happy to have a chance to discuss important prior work that has influenced our thinking as well as our own speculations in Nature Immunology. Led by Julia Belk and Bence Daniel nature.com/articles/s4159…

Our work on CD4 T cell responses to persistent antigen is out now! Grateful to Yu Xia Katalin Danielne Sandor Bence Daniel Ansu Satpathy and Takeshi Egawa for the great collaboration.

Excited to share the latest preprint with Michael Angelo! While imaging studies often focus on cell objects, images capture significant info outside of cells. Enter Pixie, a pipeline for the quantitative annotation of both pixel and cell level features🧵biorxiv.org/content/10.110…

Happy to share that our work is online Molecular Cell. Our single-cell chromatin atlas of macrophage polarization reveals cyclical macrophage plasticity states in cell cycle. Great collaboration with Julia Belk, Howard Chang & Ansu Satpathy. cell.com/molecular-cell…

Out today in Nature Protocols, our detailed writeup on the mitochondrial scATAC-seq assay, spanning everything from the molecular biology to computational analyses. Check out the paper here: rdcu.be/c5HAJ and some highlights in this thread: (1/11)

Out on bioRxiv, I'm excited to share our latest deep dive into the world of mitochondrial genetics using single-cell genomics. Grateful to have worked with LeifLudwig, Ansu Satpathy, and many others. biorxiv.org/content/10.110… Thread here: 1/n