Some folks asked for more info on this work. Thanks! It pictures molecules (or other structures) as objects built out of smaller components, and asks how much information is necessary to describe the assembly process for a given structure. 1/

Now out in Physical Review E: doi.org/10.1103/PhysRe…

And here is a follow-on preprint analysing some of the challenges in creating larger circuits from these molecular mechanical logic gates, particularly considering the effects on reversibility: doi.org/10.48550/arXiv…

This preprint introduces a new member of the oxDNA and oxRNA family of coarse-grained nucleic acid models that allows RNA-DNA hybrids to be modelled: doi.org/10.48550/arXiv…

Our new model for DNA and RNA coarse-grained simulations is now out in The Journal of Chemical Physics : doi.org/10.1063/5.0199… It is called #oxNA and includes oxDNA and oxRNA and #oxRNA models, and adds support for hybrid DNA:RNA duplexes: 🧵1/4