Also, if you want a fancy movie of the predicted states of your protein fold, i adapted the ColabFold implementation of ESMFold to do this in this notebook. Also #ChimeraX is needed colab.research.google.com/drive/14E0AR3s… Here are 3 examples with distincts folds. This is the Top7 fold :)

OPIG Postdoc Olly Crook (Oliver M. Crook) has released the RexMS package for residue-level analysis of hydrogen deuterium exchange mass spectrometry (HDX-MS) data. Read the preprint here: biorxiv.org/content/10.110… And explore the codebase here: ococrook.github.io/RexMS/

New in #ipymolstar version 0.0.4: directly load your local data files `pip install "ipymolstar==0.0.4"` github.com/Jhsmit/ipymols…

AnyWidget+Solara: How to build a basic widget with AnyWidget by trevor manz in a Solara Solara app

We have several positions open in our lab ! 📢🥳 Check our tweet feed !

Super excited to announce the pre-release of PyCafe 🎉 py.cafe is a platform that lets you create, run, edit, and share Python (web) applications directly in your browser. No installation is needed—just a single click, and it runs! #Python #pyodide 🧵👇🏻

By popular demand: How much monomer/dimer/tetramer are formed at steady-state given the two kds and the total concentration of protomer? 🧐 py.cafe/jhsmit/tetrame…

Just out in time for Michele's viva tomorrow - his Magnum Opus (what a 4 month progress report can turn into!). Anything you ever didn't care to ask about HDX software is here - well almost 🙂 And good luck tomorrow morning for x-less Michele!

FRET correlation functions, a new model-free analysis tool. For dynamics from nano to milliseconds in diffusion-based smFRET experiments. Clean correlation functions, no diffusion component left. Perfect to verify HMM fits. biorxiv.org/cgi/content/sh…