Found a hit with GSEA? Want to better understand an #MSigDB gene set? Now you can easily explore related networks with MSigDB integration for The NDEx Project IQuery! Check it out at gsea-msigdb.org from our Investigate Gene Sets tools, just look for the "query NDEx" button!

Live with #msigdb 7.1! Major update to our predicted miRNA and Transcription Factor Target sets with new data from miRDB (mirdb.org) and GTRD (gtrd.biouml.org). Content updates from Gene Ontology @[email protected], reactome, and Gene Symbols from Ensembl. gsea-msigdb.org

Do you use IGV? Do you develop with igv.js? Help our proposal for renewed funding by telling us how IGV has benefited your work and why the IGV resource should be sustained. Email [email protected] or DM IGV Team by May 18, 2020 #bioinformatics #genomics #ngsdata

#MSigDB 7.2 out now! Includes new WikiPathways and HPO gene sets! We've also updated Gene Ontology @[email protected], reactome, and added a number of #SARSCoV2 sets among other miscellaneous changes. Gene annotations from Ensembl 101. See gsea-msigdb.org for details #Bioinformatics

Today we celebrate the 15th anniversary of the original publication of GSEA in PNASNews! Here's to all the people that made this milestone possible! Thank you for letting us support your research! pnas.org/content/102/43…

#MSigDB 7.3 out now! A new sub-collection of vaccine response gene sets courtesy of HIPC, many new cell type signatures, updates for WikiPathways, HPO, Gene Ontology @[email protected], and reactome. Gene annotations from Ensembl 103. See gsea-msigdb.org for details #Bioinformatics

We've updated #msigdb to 7.4. This release is a small update that contains new versions of gene sets from Gene Ontology @[email protected], reactome and a small bug fix for certain signatures in C8 that were introduced in v7.3. See gsea-msigdb.org for details #Bioinformatics

GSEA 4.2.0 just released on gsea-msigdb.org! There is a new correlation metric (Spearman) and a new collapse mode (Absolute Max), plus many other fixes. Updated Log4J to 2.16.0 FTW! #msigdb #Bioinformatics #Genomics

GSEA 4.2.1 available now at gsea-msigdb.org. This is a security update bumping Log4J to 2.17.0. All users are encouraged to update! #msigdb #Bioinformatics #Genomics

We’ve updated #MSigDB to 7.5! This release updates gene annotations to Ensembl 105, and contains sets from the latest versions of reactome, WikiPathways, Gene Ontology @[email protected], HPO and more. See gsea-msigdb.org for details #Bioinformatics #NCIITCR

GSEA 4.2.3 available now at gsea-msigdb.org. This is a security update removing Log4J entirely from the code base. All users are encouraged to update! #msigdb #Bioinformatics #Genomics #NCIITCR

MSigDB gene sets are now available as JSON bundles at gsea-msigdb.org. Full-collection downloads or custom search #Bioinformatics #NCIITCR

New release of MSigDB (2022.1) is out! MSigDB now has two parts, 2022.1.Hs is the new release of MSigDB’s standard human gene sets, and introducing MSigDB 2022.1․Mm designed for native analysis of mouse data. Get them now from msigdb.org #nciitcr #Bioinformatics

Calling GSEA and MSigDB users! We are submitting a grant proposal for renewed funding. Please consider sending us a short email of support. See our website for details gsea-msigdb.org

MSigDB 2023.1 has been released for the human (2023.1.Hs) and mouse (2023.1.Mm) collections with updated sets from Gene Ontology @[email protected], reactome, WikiPathways, HPO and more. Get it now! msigdb.org #nciitcr #Bioinformatics

With MSigDB 2023.1 we introduced a SQLite DB for the gene sets in both the Human and Mouse resources. The new format brings the MSigDB contents and metadata with all the power of a full relational database. Available now at gsea-msigdb.org! #nciitcr #Bioinformatics

Final day of #AACR23 and MSigDB is here with a poster! Come by Section 31 Poster #1 and ask all your burning Enrichment Analysis questions while you've got the chance!

We've added a new interactive heatmap tool #NGCHM to gsea-msigdb.org from NGCHM, allowing dynamic exploration of the expression profile of #MSigDB gene sets. Check it out on our Investigate page! #nciitcr #Bioinformatics MD Anderson Cancer Center

The widely used GSEA/MSigDB resource is extending its support for mouse data. nature.com/articles/s4159…

Our new publication describing the development of our Mouse-native MSigDB Collections is out now in Nature Methods! Go check it out! nature.com/articles/s4159…