Danilo Dubocanin (@dubocdan) 's Twitter Profile
Danilo Dubocanin

@dubocdan

Genetics PhD Student in the Altemose Lab @Stanford

ID: 1623768288886132736

linkhttps://sites.google.com/stanford.edu/danilodubocanin/ calendar_today09-02-2023 19:38:30

39 Tweet

42 Followers

116 Following

Betty Liu (@bettieliu) 's Twitter Profile Photo

Delighted to share our latest work deciphering the landscape of chromatin accessibility and modeling the DNA sequence syntax rules underlying gene regulation during human development! biorxiv.org/content/10.110…. Read on for more 🧵 [1/16]

Anders Sejr Hansen (@anders_s_hansen) 's Twitter Profile Photo

(1/n) New preprint from clarice Fan Fang Varshini Ramanathan in collab w Jie Liu Q: How do we get ultra-high-res 3D genome maps? A: New deep learning model, Cleopatra. Cleo trains on Micro-C, fine-tunes on RCMC, and predicts genome-wide 3D maps biorxiv.org/content/10.110…

(1/n) New preprint from <a href="/claricehongky/">clarice</a> Fan Fang <a href="/VarshiniRam23/">Varshini Ramanathan</a> in collab w Jie Liu

Q: How do we get ultra-high-res 3D genome maps? 

A: New deep learning model, Cleopatra. 

Cleo trains on Micro-C, fine-tunes on RCMC, and predicts genome-wide 3D maps
biorxiv.org/content/10.110…
Stergachis Lab (@stergachislab) 's Twitter Profile Photo

Plasmid-based reporter assays are the bedrock of regulatory genomics. But a basic question has gone unanswered for decades: Do chromatin architectures form on plasmids transfected into mammalian cells—and does it matter? We finally have answers. biorxiv.org/content/10.110…