🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

Are you an undergraduate that will be looking for a future summer research/internship opportunity? If yes, then @ACS_ANYL Ed. Committee invites you to join a Discussion Hour on Undergraduate Summer Research on Friday, Oct 25 at 12pm EDT. Register here: shorturl.at/sT4AO

Rethink the analysis of DDA data! Blurring the boundary between DDA, WWA, and DIA, #MSFragger-DDA+ Enhances Peptide Identification Sensitivity with Full Isolation Window Search. Fully integrated in #FragPipe, simply annotate your DDA files as DDA+ and RUN. biorxiv.org/content/10.110…

I had to shorten my trip to Dresden for #HUPO2024 and have a room for Friday and Saturday night, and the following Wednesday night, that will sit empty. They require 14 day cancelation notice. If anyone in a desperate need for a place to stay on those nights, email me.

I'm happy to report the publication of our latest #proteomics paper has been published in Nature Communications . Thanks to the reviewers and editors who helped us improve the manuscript! A small 🧵below nature.com/articles/s4146…

Seems like a good time for a list some of my favorite truly #OpenSource #proteomics tools. In no particular order: 1. Comet - The Sequest algorithm for everyone. github.com/uwpr/comet

I’m excited to share the first preprint out of the Altemose Lab! This stems from a heroic effort by Dr. Matt Franklin Matt Franklin (who's on the job market!), who made surprising discoveries regarding some of the most mysterious regions of the genome. biorxiv.org/content/10.110…

Excited to share our chemoproteogenomics story now out in its final form in Nature Communications. Congrats to first author Heta Desai Heta Desai! nature.com/articles/s4146…

This is great! NIAID News have launched a collection of public domain illustrations (currently 550 individual icons) bioart.niaid.nih.gov

Open faculty positions announcement: 2 advanced HF faculty positions are available at The University of Arizona. All faculty ranks. Competitive salaries and startups. Message me for more details. Plz repost.

Beyond thrilled to present our O-MAP—now *published* Nature Methods (!!!) O-MAP is a powerful new method for biochemically "dissecting" the subcellular microenvironment around an RNA of interest, using off-the-shelf parts and standard manipulations. 🧵 nature.com/articles/s4159…

...and the O-MAP hits keep coming! Exciting new work spearheaded by @oligopain and Devin Schweppe is now applying O-MAP to *DNA LOCI* 👀. A super exciting project for which we're humbled to have played a part. Congrats to the entire team!! tinyurl.com/msr7e7wt

Blood donors offer a window into "healthy" aging. Now out Aging Cell, we report that arginine metabolism in >13k blood units, 587 sickle cell patients and 525 diversity outbred mice was linked to donor and RBC age, vesiculation and transfusion efficacy doi.org/10.1111/acel.1…

Addressing reviewer concerns today as a means to stay calm in the face of world events may not have been the best idea… Got dinged by R2 as our basepeak intensity was “only” 7e9. So that I can educate myself, what average basepeak intensity means “high quality” data to you?

Deaminase-assisted Fiber-seq (DAF-seq) has arrived! DAF-seq is an amplification-compatible version of #Fiberseq that resolves genetic and chromatin architectures with single-nucleotide, single-molecule, single-haplotype, and single-cell precision. biorxiv.org/content/10.110…

🔬 Exciting joint postdoc opportunity between Brooke E. Howitt Stanford Medicine and us BIDMC Harvard Medical School! Join us in advancing cancer research through computational & spatial genomics. Focus on gynecologic cancers & womens health at Boston/Stanford nature.com/naturecareers/…

It's my pleasure to present the next big preprint from SheqLab! An exciting application of our O-MAP platform that I hope will transform the study of nuclear architecture. If you've ever wanted to dissect the subnuclear "neighborhood" around an individual locus, read on! (1/30)

AI Proteins is excited to partner with Bristol Myers Squibb to develop novel miniprotein-based therapeutics. This collaboration will leverage our cutting-edge AI-driven platform to design and optimize miniproteins with the potential to transform patient outcomes. businesswire.com/news/home/2024…

This JAMA Insights explores the capability of proteomics to analyze thousands of proteins in patient samples, which could improve clinicians’ understanding of and ability to treat a wide range of diseases. ja.ma/4jvNHbP Devin Schweppe