Today we’re excited to freely share an early-version of, perhaps, the world’s most expansive genetics dataset: Logan. #bioinformatics #petabase #genetics #genomics #openscience biorxiv.org/content/10.110…

Scientific seminars are resuming at full speed in the dpt. We'll have two great speakers in September: @FlorenceBansept on Sept 26 to discuss Host-associated microbial communities, and Ahmed Mahfouz on Sept 27 to talk about single cell and spacial genomics data analysis!

#TalentsCNRS🥉 | Laura Cantini : une médaille de bronze à l’interface entre mathématiques et biologie. Son objectif ? Apporter des outils d’aide à la compréhension du développement des organismes et des maladies humaines. ▶️ buff.ly/3ZxAQOT

After a very constructive back and forth with editors and reviewers of Nature Communications, scConfluence has now been published @LauCan88 Gabriel Peyré ! I'll present it this afternoon at the poster session of ECCB2026 Geneva, Switzerland (P296) Published version: nature.com/articles/s4146…

Don't miss poster P296 today at ECCB2026 Geneva, Switzerland if you want ro know more about unpaired multi-modal data integration from Jules Samaran !!!!

Do you want to work at the interface of structural biology and #AI? We are #hiring Come to Paris for a CNRS 🌍 postdoc at Institut Pasteur, since 1887 funded by European Research Council (ERC) and co-supervised by @malletvincent Please RT!! #deeplearning #compbio More info here: research.pasteur.fr/b/vVT

🚨Preprint alert! tinyurl.com/2zkmynsd Did you ever dream of generating spatial maps of #enhancer activity at #singlecell resolution in a multicellular organism using massively parallel enhancer-reporter assays? Then spatial-scERA is the method for you!

Happy to share with you "Integrative spatial and genomic analysis of tumor heterogeneity with Tumoroscope", with Shadi Shafighi, Ewa Szczurek, and ..... rdcu.be/dYuYO Great work Shadi!

We' re #hiring a #postdoc in my team Institut Pasteur, since 1887 CNRS 🌍 funded by PRAIRIE Institute to work on the inference of molecular mechanisms from the integration of spatial transcriptomics and #singlecell multi-omics data. Learn more at emploi.cnrs.fr/Offres/CDD/UMR…

Welcome to two new lab members Clément (cosupervision Luca Pinello )and Anna Audit (cosupervision Gabriel Peyré )! Recruited on European Research Council (ERC) project MULTI-viewCELL. They will work on GRN inference and cell trajectory inference from temporal single-cell RNA data, respectively

New from our lab (from Tobias Bernecker and Ghalia Rehawi): ARROW-Diff (AutoRegressive RandOm Walk Diffusion), a fresh approach for efficient graph generation. Looking forward to apply it to gene regulatory networks and biomolecule design. Check it out: tinyurl.com/5xbf7pjn

Laura Cantini, chercheuse au CNRS 🌍 et à l’Institut Pasteur, récompensée par la médaille de bronze du CNRS 2024. Entre mathématiques et biologie pour apporter des outils d’aide à la compréhension du développement des organismes et des maladies humaines. 👉insb.cnrs.fr/fr/personne/la…

🎄🎁 Christmas preprint alert! 🎁🎄 We present a novel approach to integrating patient-specific gene regulatory network models (GRNs) with multi-omics data to enhance cancer survival predictions 🧬📊 👉 Read it on BioRxiv: biorxiv.org/content/10.110… 🧵 Highlights below!

🚨 Job alert 🚨 1 PhD + 1 Technician Our lab is looking for motivated candidates interested in understanding the impact of diets and lifestyle on tumor development, anti-tumor immunity and metastasis! Apply and join our team! Info below 👇 .. please RT 🙏

🇫🇷Depuis 2007, Fondation L'Oréal s'engage avec l'UNESCO 🏛️ #Education #Sciences #Culture 🇺🇳 et Académie des sciences pour accélérer les carrières des jeunes chercheuses. Les candidatures pour le Prix Jeunes Talents France 2025 L'Oréal-UNESCO sont ouvertes. Candidatez avant le 26 février 👉 bit.ly/4fTEozm #FWIS2025

Excited to see scPRINT published in Nature Communications ! scPRINT is a large cell model for the inference of gene networks pre-trained on 50Mcells with innovative pretraining tasks inspired from biology. Work led by Jérémie Kalfon

🚀 Our perspective is out in nature! We present a roadmap for Multimodal Foundation Models (MFMs) — large AI models pretrained across multi-omics and multi-timepoint data — to serve as the computational backbone for building virtual cells. Read the full paper in Nature:

.Jérémie Kalfon @julessamaran Laura Cantini Gabriel Peyré present a foundation model trained on 50 million cells, generating a meaningful gene network with zero-shot ability. #BiotechNatureComms Nature Communications nature.com/articles/s4146…

#ResultatScientifique🔎 | scPRINT : le premier modèle d'IA français pour déchiffrer les réseaux génétiques 🤝 CNRS 🌍 CNRS Ile-de-France Meudon ✍️ Laura Cantini & Gabriel Peyré 📕 Nature Communications | buff.ly/LV1EW0h buff.ly/XMcDog0