Andreas Rempel
@andreas_rempel
PhD student @unibielefeld @PangaiaProject @alpacaitn #computerscience #bioinformatics #genomeresearch π§¬
ID: 2271456013
01-01-2014 10:08:49
12 Tweet
39 Followers
21 Following
Good luck and best wishes to Boas Pucker and the Bielefeld #iGEM2018 team. Can't wait to hear more about the #iGEM2019 team on November 7.
For those of you interested in #plantgenomics and #bioinformatics, I'm happy to share a new #preprint bioRxiv: 'Comparison of read mapping and variant calling tools for the analysis of plant NGS data' doi.org/10.1101/2020.0β¦ Boas Pucker Hanna Marie Schilbert
Very happy to see our new preprint is online bioRxiv Plant Bio ! See if you can find #flavonoid producing enzymes in your data set with our tool KIPEs πΊπ»πΉπ·πΌπΈ #phdchat #phdlife #pigments #WomenWhoCode #WomenInSTEM
It's out! Happy to present KIPEs for the automatic identification of flavonoid biosynthesis genes in any plant species Please Retweet! Boas Pucker Franziska Reiher Plants MDPI #WomenWhoCode #openscience #openaccess #WomenInSTEM #phdVoice #plantSci #phd bit.ly/2EKzuZn
Excited to see our paper being promoted as Editor's Choice! Hanna Marie Schilbert Boas Pucker Plants MDPI In case you have missed it, we performed a benchmarking study comparing several read mapping and variant calling tools for the analysis of plant NGS data: doi.org/10.3390/plantsβ¦ π±
Zainul-Abideen Great question! You could use our MYB annotation tool to identify the MYBs in Musa paradisiaca and to identify the differences: doi.org/10.1186/s12864β¦. There is also a web server for more convenient use: pbb.bot.nat.tu-bs.de/MYB_annotator/ Andreas Rempel
Interested in pathways? KIPEs3 is available through our web server: pbb.bot.nat.tu-bs.de/KIPEs/ Please find more details here: 'KIPEs3: Automatic annotation of biosynthesis pathways' doi.org/10.1101/2022.0β¦ Many thanks to Andreas Rempel for his excellent work! #Bioinformatics