🆕😎Je suis très heureux de diffuser une offre de thèse sur les déterminants génétiques associés aux isoflavones et composés antinutritionnels du soja. 📍Cela se passera dans notre laboratoire de @EcoledePURPAN. Plus d'informations ⬇️ linkedin.com/posts/cyril-li…

Here our new paper with ECOGEN Lab bsppjournals.onlinelibrary.wiley.com/doi/10.1111/pp… We isolated P. syringae strains from south of France and performed GWA on a A. thaliana from the north. We identified the AT5G18310 encoding ubiquitin hydrolase, a target of the AvrRpt2 P. syringae effector.

Mireille Chabaud, from Plants Microbes Environment celebrated her corresponding author manuscript accepted for publication in New Phytol. How #Orobanche cumana penetrates #sunflower root cells to connect to the vascular system. But she will retire April 1st 😭

Thrilled to welcome Ibrahim KEITA as a new PhD student in the team Plants Microbes Environment INRAE Occitanie-Toulouse! Ibrahim will study the regulatory functions of lncRNAs during plant-microbe symbiosis ☘️🧬 a fellowship generously funded by INRAE Santé des Plantes et Environnement and Région Occitanie 🙏

Happy to share our new preprint from European Research Council (ERC) project HoloE2Plant. And happy Xmas! Plant genetic bases explaining microbiota diversity shed light into a novel holobiont generalist gene theory biorxiv.org/content/10.110…

First run on our #P2solo sequencer from @Nanopore Plants Microbes Environment with bacteria, plant and fungi DNA samples. Impressive output of 107 Gb in only 2 days 🔥🔥! And the flowcell still has plenty of active pores 🙂 Great team work with Sandra Moreau, Aurelien Carlier and Ludovic Legrand!

High simplex & duplex Qscores from @Nanopore data! Very consistent for different organisms. Data generated with Native kit V14 & basecalled with dorado v0.5.2 (SUP). Qscores calculated by mapping reads on PB HiFi references with Minimap2+NanoPlot (credit to J. Gouzy)

📢Dive into Evolution in Paris 🗼with EvoGEM! Our #MasterProgram (M2) offers 5 months of courses in evolution, modeling, math, population and quantitative genetics, and genomics. 🎓 All courses in English. Apply by July 19th, 2024. Visit evogem.fr #EvoGEM 📚

Retour intermédiaire aux agriculteurs du réseau DeepImpact qui nous avaient permis de mener ces 2 campagnes de terrain sur les 200 parcelles en blé et colza

Sugarcoating colonization. Eliza Loo PalomaD &Frommer Heinrich-Heine-Universität Düsseldorf examine organization of #microbiota along longitudinal axis of #Arabidopsis root. SWEET transporters contribute to sugar distribution, which is req'd for spatial colonization of bacteria cell.com/cell-host-micr…

It has already been shown but here are additional examples that Oxford Nanopore sequencing enables to generate highly accurate bacterial genome assemblies! Credit to Aurelien Carlier for these analyses Plants Microbes Environment

Thrilled to have our collaborative project #SYM2PLANTS selected for funding by INRAE Santé des Plantes et Environnement! With M. Hanemian ECOGEN Lab we will explore how plant-plant interactions impact nitrogen-fixing symbiosis in legumes 🫛🫘☘️ Congratulations to all awardees! spe.intranet.inrae.fr/la-recherche/a…

Our latest paper is online! Cell wall-mediated root development is targeted by Ralstonia to promote infection By Gang Yu et al Cell Reports doi.org/10.1016/j.celr… Besides the main topic, we also uncover a different regulation of immunity in roots vs leaves: 👇🧵 (1/8)

New paper: #variation and #plasticity in life-history traits and fitness of wild #Arabidopsis thaliana populations are not related to their genotypic and ecological diversity rdcu.be/dHwRP BMC Estación Biológica de Doñana - CSIC Centro Nacional de Biotecnología (CSIC) CREAF Indehesa - Instituto de Investigación de la Dehesa GMI Vienna

200 Gb of data generated with a single Oxford Nanopore PromethION Flow Cell without any wash/reload! First part of the run generated 183 Gb of data in 72H and the second part with the barcode balancing option on yielded another 20 Gb in 15H! Plants Microbes Environment

[#PhD] 🎓La 3ème doctorante de la semaine nous présente sa thèse sur "Interactions plante-plante: Analyse fonctionnelle d'un gène de réponse à la compétition chez #Arabidopsisthaliana 🌱 Le jury: #ElsaBallini,#PierreAbad, Jean-Philippe Galaud, #SophieJasinski, #FabriceRoux,Mathieu H

Fantastic new study from a collaboration of two former WeigelWorld postdocs/group leaders: A phage tail–like bacteriocin suppresses competitors in metapopulations of pathogenic bacteria Hernán A. Burbano & Talia Karasov science.org/doi/10.1126/sc…

[#MédiationScientifique] Ravis d'accueillir 70 préparateurs de TP des lycées de l'académie, pour une visite de nos installations #TPMP #transgenèse 🌱 & équipes ECOGEN Lab #lipme_Six 🦠 LIPME_EFIS #lipme_Phyllosym Merci à #FrançoiseJardinaud & Vicedo Céline pour l'organisation

Two postdoctoral positions available in my group to investigate centromere structure, function and evolution - please get in touch if you are interested! jobs.cam.ac.uk/job/47525/ jobs.cam.ac.uk/job/47569/

After almost 2 years, I can no longer fight the transohobia at Aberdeen, it's out of control and it's destroying me. All I can do now is try to put my head down and finish this PhD, and warn any potential staff/students away from a deeply racist and queerphobic institution