
Roozbeh Dehghannasiri
@roozbehdn
Instructor at @StanfordMed, interested in statistical & ML methods for scRNA-Seq and RNA splicing @StanfordDBDS @StanfordBiochem
ID: 636407631
15-07-2012 17:30:58
34 Tweet
57 Followers
175 Following

š« First draft of the Human Cell Atlas Lung Cell Atlas integrates 14 #SingleCell data sets from the global scientific community, including European Commission discovAIR project, Chan Zuckerberg Initiative Seed Networks, Chan Zuckerberg Biohub Network + more. Read the preprint bit.ly/3KFUmOr



A big day for life science The Tabula Sapiens, like a Periodic Table of Human Cells, ~500,000 cells analyzed, 24 tissues / organs Science Magazine "a broadly useful reference to deeply understand and explore human biology at cellular resolution" science.org/doi/10.1126/scā¦


Out today in Science Magazine, the Tabula Sapiens is 1 of 4 new open-access cross-tissue human cell atlases. This is a major milestone for #singlecell biology, giving us a deeper understanding of the human body and the diseases that afflict it. bit.ly/3FFbMsZ

Congratulations to everyone involved in four highly collaborative multi-tissue @HumanCellAtlas studies in Science Magazine today, which bring the HCA goal of mapping every cell type in the human body a milestone step closer. humancellatlas.org/multi-tissue-cā¦

ReadZS, from Elisabeth Meyer, Chaung, Roozbeh Dehghannasiri & Salzman, for identifying RNA processing (splicing, alternative polyadenylation etc) in RNA-seq data, without the need for pre-existing annotations. It works on both 3'-enriched and non-enriched data genomebiology.biomedcentral.com/articles/10.11ā¦



A large-scale study from Jo Vandesompele and colleagues benchmarks computational tools for circRNA detection, as well as provides a resource of 315,000 unique putative circRNAs detected in 3 human cell types. nature.com/articles/s4159ā¦

Our August issue is live! š nature.com/nmeth/volumes/⦠On the cover, a benchmarking study assessed 16 bioinformatics tools for their abilities to capture true-positive and false-positive circular RNAs. Cover by DrawImpacts.

