Kyle Swanson (@kylewswanson) 's Twitter Profile
Kyle Swanson

@kylewswanson

I'm a PhD student in Computer Science at Stanford University. My research focuses on machine learning applied to biomedicine and drug discovery.

ID: 1235265480341979136

linkhttps://swansonkyle.com/ calendar_today04-03-2020 18:07:13

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603 Followers

339 Following

Kyle Swanson (@kylewswanson) 's Twitter Profile Photo

If you're interested in ADMET prediction for drug discovery, please check out ADMET-AI, a free, open-source AI platform for large-scale ADMET prediction that I built with Greenstone Biosciences and James Zou. See the thread for more details and try it out at admet.ai.greenstonebio.com!

James Zou (@james_y_zou) 's Twitter Profile Photo

Researchers invent artificial intelligence model to design new superbug-fighting antibiotics #McMaster #Stanford brighterworld.mcmaster.ca/articles/artif…

Kyle Swanson (@kylewswanson) 's Twitter Profile Photo

Sharing a blog post I wrote about our recent work on ADMET-AI for fast and accurate prediction of important druglike properties of molecules. Check it out below and try ADMET-AI at admet.ai.greenstonebio.com

Shirley Wu (@shirleyyxwu) 's Twitter Profile Photo

Thrilled to release 🌟STaRK 🌟 - A large-scale LLM retrieval benchmark on semi-structured knowledge bases. While LLMs excel at reasoning and semantic retrieval, they struggle with more complex tasks. Especially when real-world user queries require a combination of unstructured

Thrilled to release 🌟STaRK 🌟 - A large-scale LLM retrieval benchmark on semi-structured knowledge bases. 

While LLMs excel at reasoning and semantic retrieval, they struggle with more complex tasks. Especially when real-world user queries require a combination of unstructured
Elana Simon (@elanapearl) 's Twitter Profile Photo

The Illustrated AlphaFold bit.ly/the-illustrate… Do you want to know how AlphaFold3 works? It has one of the most intimidating transformer-based architectures, so to make it approachable, we made a visual walkthrough inspired by Jay Alammar's Illustrated Transformer! 🧵 (1/7)

The Illustrated AlphaFold
bit.ly/the-illustrate…

Do you want to know how AlphaFold3 works? It has one of the most intimidating transformer-based architectures, so to make it approachable, we made a visual walkthrough inspired by <a href="/JayAlammar/">Jay Alammar</a>'s Illustrated Transformer!

🧵 (1/7)
Kyle Swanson (@kylewswanson) 's Twitter Profile Photo

ADMET-AI is now published in Bioinformatics! ADMET-AI provides free, fast, & accurate prediction of absorption, distribution, metabolism, excretion, & toxicity properties of molecules at admet.ai.greenstonebio.com Blog: portal.valencelabs.com/blogs/post/adm… Paper: academic.oup.com/bioinformatics…

James Zou (@james_y_zou) 's Twitter Profile Photo

📢#AI predicting molecule properties to guide drug discovery. Our updated ADMET-AI paper is now published: 📰 Paper: academic.oup.com/bioinformatics… 🌐 Interactive website admet.ai.greenstonebio.com Great job led by Kyle Swanson, Rabindra Shivnaraine in collaboration with Greenstone Biosciences!

Kyle Swanson (@kylewswanson) 's Twitter Profile Photo

I'm excited to share our Nature Methods primer on language models for biological research. Elana Simon, James Zou, and I explain how to use language models, both natural language models and biological language models, to accelerate biological research. nature.com/articles/s4159…

James Zou (@james_y_zou) 's Twitter Profile Photo

Very excited to share our primer on LLM for biology Nature Methods! We discuss how to use: ⚡️human & protein LMs (eg #ESM) ⚡️#singlecell & #multimodel LMs ⚡️when to fine-tune, transfer learn etc. Paper nature.com/articles/s4159… Colab tutorial colab.research.google.com/drive/1zIIRGeq… Written for a

Very excited to share our primer on LLM for biology <a href="/naturemethods/">Nature Methods</a>! We discuss how to use:
⚡️human &amp; protein LMs (eg #ESM)
⚡️#singlecell &amp; #multimodel LMs
⚡️when to fine-tune, transfer learn etc.
Paper nature.com/articles/s4159…
Colab tutorial colab.research.google.com/drive/1zIIRGeq…
Written for a
Kyle Swanson (@kylewswanson) 's Twitter Profile Photo

Very cool The New Yorker article by Dhruv Khullar on AI for antibiotic discovery. Thank you for covering some of our work with Jon Stokes and James Zou! References below. Chemprop: cell.com/cell/fulltext/… SyntheMol: nature.com/articles/s4225… newyorker.com/magazine/2024/…