Christoph Elfmann (@c_elfmann) 's Twitter Profile
Christoph Elfmann

@c_elfmann

@IMPRS_GS PhD student in bioinformatics at the @JorgStulke lab of @UniGoettingen, currently working on SubtiWiki's newest iteration

ID: 1478664734048145411

linkhttp://subtiwiki.uni-goettingen.de/ calendar_today05-01-2022 09:48:57

52 Tweet

99 Followers

61 Following

Jörg Stülke (@jorgstulke) 's Twitter Profile Photo

Finally online: Dennis Wicke's paper on a strongly conserved bacterial protein that interacts with RNase P and modulates its activity in Bacillus subtilis! Uni Göttingen 🤝Philipps-Universität #moty Nucleic Acids Res academic.oup.com/nar/article/do…

Christoph Elfmann (@c_elfmann) 's Twitter Profile Photo

An interactive visualization of conserved gene neighborhoods now on corewiki.uni-goettingen.de (#SubtiWiki's next version)! It features clusters created with WebFlaGs . Big thanks to Tom Nowak for his work and Gemma C Atkinson for the great FlaGs tool! @IMPRS_GS #bacillus #MOTY

An interactive visualization of conserved gene neighborhoods now on corewiki.uni-goettingen.de (#SubtiWiki's next version)! It features clusters created with <a href="/webflags1/">WebFlaGs</a> . Big thanks to Tom Nowak for his work and <a href="/gem__atkinson/">Gemma C Atkinson</a> for the great FlaGs tool! @IMPRS_GS #bacillus #MOTY
Jörg Stülke (@jorgstulke) 's Twitter Profile Photo

Check the description of the new SubtiWiki framework by Christoph Elfmann Vincenz Dumann and Tim van den Berg. Enjoy the many new features! Uni Göttingen @IMPRS_GS #SubtiWiki biorxiv.org/content/10.110…

Jörg Stülke (@jorgstulke) 's Twitter Profile Photo

Congratulations, ⁦Dennis Wicke⁩ , on receiving the thesis award of the Göttingen Center for Molecular Biosciences! ⁦Uni Göttingen⁩ #bacillus #subtiwiki #proudPI

Congratulations, ⁦<a href="/DennisWicke/">Dennis Wicke</a>⁩ , on receiving the thesis award of the Göttingen Center for Molecular Biosciences!
⁦<a href="/uniGoettingen/">Uni Göttingen</a>⁩ #bacillus #subtiwiki #proudPI
Christoph Elfmann (@c_elfmann) 's Twitter Profile Photo

I've created an offline version of the PAE Viewer with a basic CLI via Python, which you can use in your scripts. It just takes the input and opens the page in the browser with the data preloaded. Check out the new "Offline version" tab for instructions! subtiwiki.uni-goettingen.de/v4/paeViewerDe…

I've created an offline version of the PAE Viewer with a basic CLI via Python, which you can use in your scripts. It just takes the input and opens the page in the browser with the data preloaded. Check out the new "Offline version" tab for instructions!

subtiwiki.uni-goettingen.de/v4/paeViewerDe…
Christoph Elfmann (@c_elfmann) 's Twitter Profile Photo

The PAE Viewer (subtiwiki.uni-goettingen.de/v4/paeViewerDe…) now supports evaluation of ligands and PTMs in your AlphaFold predictions, and the display of DNAs/RNAs is improved! @IMPRS_GS Uni Göttingen #alphafold #subtiwiki

The PAE Viewer (subtiwiki.uni-goettingen.de/v4/paeViewerDe…) now supports evaluation of ligands and PTMs in your AlphaFold predictions, and the display of DNAs/RNAs is improved! @IMPRS_GS <a href="/uniGoettingen/">Uni Göttingen</a> #alphafold #subtiwiki
Christoph Elfmann (@c_elfmann) 's Twitter Profile Photo

Finally fixed some issues with PTMs for the PAE Viewer! Instead of the per-atom PAE which #AlphaFold outputs for modified amino acids, the average per-residue PAE is now displayed. subtiwiki.uni-goettingen.de/v4/paeViewerDe…