Resource recovery from wastewater sludge: Impact of phosphorus on the functional properties of extracellular polymers. WATER-MINING H2020 Water Research sciencedirect.com/science/articl…

Overpublishing burns out students & professors. BUT it profits publishers & creates incentives. The new study shows that the number of papers is increasing FASTER than the number of PhD graduates. It’s a great work with very useful statistics. Huge kudos to the authors. 📍

Excited to share our publication in Water Research! We analyzed 9 AGS WWTPs to uncover how aggregate size influences core microbial communities and functional group selection 📰doi.org/10.1016/j.watr… 👨‍🔬Dario R. Shaw Pascal Saikaly🇱🇧🇺🇦🇸🇦 Muhammad Ali Mark van Loosdrecht  #MarioPronk

An atlas of metabolites driving chemotaxis in prokaryotes | Nature Communications nature.com/articles/s4146…

Congrats Dr Ezequiel Santillan & team! Featured in PNAS for his work at #SCELSE, transforming industrial wastewater into sustainable aquaculture feed! A game-changer for the circular bioeconomy. Read more: pnas.org/doi/epub/10.10…… #PNAS #Sustainability

Come for the water solutions to the Netherlands Stay for the knowledge and network. Deadline for abstracts and sessions is approaching: 15 February 2025 wses2025.dryfta.com/index.php

An excellent web-based resource for creating colorful phylogenetic trees for free 🆓 🔗 How to draw a phylogenetic tree? youtu.be/djfpSq26akI #bioinformatics #genomics #phylogenomics

Check out our nature review with Tiannan Guo Guomics and Judith Steen Judith Steen on recent paradigm shifts in MS-based proteomics - where the field stands and where its headed. #Proteomics #AI nature.com/articles/s4158…

Power-to-Protein: Electro-cultivation of microbial proteins from recycled nitrogen and carbon dioxide sciencedirect.com/science/articl… Kudos to LEQUIA-UdG; Silvio Matassa & Yifeng Zhang

In 2024, sandbox.bio had >170,000 tutorial page views! 🥳 The most popular tutorials were: 1. ​Terminal basics 2. ​Genomic intervals with bedtools 3. ​Terminal exercises 4. ​Data exploration with awk 5. ​DNA sequencing QC Check them out here: sandbox.bio/tutorials

geneviewer - Gene Cluster Visualizations in R. Imports data from GenBank, FASTA, and GFF files, performs BlastP and MUMmer alignments, and displays results on gene arrow maps. github.com/nvelden/genevi… #Rstats

Cometabolism of ferrihydrite reduction and methyl-dismutating methanogenesis by Methanosarcina mazei. #methanogens #methane #archaea ASM AppEnvMicro journal Yahai Lu journals.asm.org/doi/10.1128/ae…

nf-core-wgsnano- Nextflow pipeline for analysis of Nanopore Whole Genome Sequencing github.com/dhslab/nf-core…

GNNome was published in Genome Research! This is a novel paradigm for de novo genome assembly based on GNNs. Without explicitly implementing any simplification strategies, it can achieve results comparable or higher than other SOTA tools. Paper, code, and overview are 👇 [1/8]

A novel cable bacteria species with a distinct morphology and genomic potential #microbiology #bacteria ASM AppEnvMicro journal journals.asm.org/doi/10.1128/ae…

Engineering the hyperthermophilic archaeon Pyrococcus furiosus for 1-propanol production P. furiosus grows optimally at 100 °C and was isolated from marine sediments of Vulcano island, Italy. journals.asm.org/doi/10.1128/ae… #GeneticEngineering #Microbiology #Extremophiles #Archaea

Current trends in electromicrobiology of methane oxidation #methane #microbiology #bacteria #archaea Trends in Microbiology Cell Press sciencedirect.com/science/articl…

The green potential of grass-based anaerobic digestion biorefineries for a circular bioeconomy sciencedirect.com/science/articl…

The ChimeraX 1.10 release candidate and daily builds can predict small complexes of proteins, nucleic acids and small molecules using Boltz on your Mac, Windows or Linux computer. rbvi.ucsf.edu/chimerax/data/…

It is iconic, but always good to remember that sanitation contributes at least equal to health as the medical field - at a much lower cost. Pity sanitation is still a problem in large parts of the world #mewe #cdc