Using the 🆕 spatial transcriptomics feature in CZ #CellxGene, we reproduced the key finding of a study from 𝓟𝓮𝓷𝓰 𝓗𝓮 何鵬 in the Teichmann lab showing transcriptionally + spatially distinct mesenchyme populations in the autopod. Explore the dataset ➡️ bit.ly/4cCLxSW

Consistent cell type nomenclature is crucial for AI/ML progress. Our Reproductive Annotation Jamboree united researchers from across reproductive biology to streamline #SingleCell data. Updates made during the event could reduce harmonization time from months to weeks.

No cell is an island! Jialin Liu + Josh Welch’s new computational algorithms, CytoSignal + VeloCytoSignal, will detect the molecular messages that cells send each other to understand how they work together in complex tissues

In Radiology scientists shared that @HiP-CT bridges the gap between traditional imaging + histology, offering a comprehensive look at the heart’s structure & potential disease indicators bit.ly/4dSsdCq

From providing insights into optimizing carbon removal rates to cultivating scientific communities, we support organizations advancing climate solutions. Read how ⬇️ czi.co/3WUS59R

Electron micrograph of optic nerve projections from the eye entering the brain via the visual thalamus. Imaging scientist Josh Morgan uses array tomography of electron micrographs to apply high-resolution synapse imaging to the reconstruction of whole neural circuits

Researchers @gioelelamanno Luca Pinello + Eli Bingham are furthering #SingleCell RNA Velocity analysis by developing 📌 Pyro-Velocity, a model that estimates the uncertainty of future cell states 📌Pyro-Speed, a method for supervised statistical testing

Actin rings in axons of cultured neurons. Imaging scientist Paula Sampaio wants to understand the formation and behavior of these structures to learn how the cytoskeleton contributes to neurotransmission & regeneration 📸: Maria Azevedo and Ana Rita Leitão

To better understand neurogenesis in response to injury and disease, Maria Antonietta Tosches studies glial cells in the salamander brain that have similar properties to mammalian astrocytes & neural stem cells 🟡fluorescent protein electroporated in selected ependymoglia in vivo 🔵nuclei

Scientific societies play a pivotal role in advancing research + fostering community. Inspired by NEUBIAS, Robert Haase & team are building a society for bioimaging analysis to share expertise and promote image data ethics in scientific research GloBIAS

Have you tried the new spatial transcriptomics feature in CZ #CellxGene Explorer yet? Explore datasets or submit yours ​​➡️ bit.ly/3WUDAUv

This mosaic depicts the structural dynamics of human skeletal muscle mitochondrial networks. Imaging scientist Clara Prats wants to democratize access to image acquisition and analysis tools so life scientists can efficiently extract data from high dimensional images

.Gary Reynolds + Alexandra-Chloé Villani Lab are building a reference atlas of 14M blood cells that will help accelerate the translational potential of human blood #SingleCell data. #TranslationalMedicine

High-performance computing 🤝 biology! Learn how we’re reducing barriers for researchers to access AI models that accelerate their work + offer new insights about cells & cell systems bit.ly/3A4IdT3

How does a cell's past influence its future state? With ENGRAM, they can record + store their own history. Shoutout to the teams at #SeaSynBio + Brotman Baty & our partners Allen Institute for pushing the boundaries of genomic science bit.ly/4de1fEJ

Imagine unraveling a medical mystery late on a Saturday night! Joe DeRisi of Chan Zuckerberg Biohub Network SF + Aaron Bodansky did just that with MIS-C after SARS-CoV-2 infection. Congratulations on the publication of your 🆕 paper bit.ly/3SIcQEq

📡🧵 Excited to release our preprint: Ultrack: Pushing the Limits of Cell Tracking Across Biological Scales doi.org/10.1101/2024.0… A tour-de-force by Jordão Bragantini, #Ultrack is a versatile, highly accurate, and fast ILP-based cell tracking software for 2D, 3D, and multicolor

.Robert Haase + his colleagues are working to disseminate state-of-the-art bioimage analysis tools & forming a scientific community that will: 🧑🏽‍🏫 Develop workshops for image analysts 📚 Organize & share publications

Kota Miura is #ImagingTheFuture by working toward a more profound understanding of biology through increased access to bioimage analysis education

The new atlas of the heart created using @HiP-CT could inspire novel treatments for cardiac rhythm abnormalities + congenital heart defects 👏 bit.ly/3yd5WzI