Ken Xie (@curiouskx) 's Twitter Profile
Ken Xie

@curiouskx

Postdoc Fellow @IdoAmitLab. Interested in deciphering the complex cell-cell interactions in tumors

ID: 1577861734815174658

calendar_today06-10-2022 03:22:25

394 Tweet

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T. San Phan (@tgsanphan) 's Twitter Profile Photo

So cool!🥳 Our study is out Science Advances | Anti-inflammatory #Glucocorticoids by keratinocytes - a mechanism to control #skin #inflammation. Thx to former ugstuds Leo, Jasmin, Verena & all collaborators/mentors/friends Sarah Mundt & patients/hdonors! advances.sciencemag.org/content/7/5/ea…

Luke Yun (@luke_yun1) 's Twitter Profile Photo

Yale and Google trained a 27B parameter model, C2S-Scale, to unify single-cell transcriptomics and biological language for deep reasoning across genes and cells. It outperforms prior models in interpretation, QA, and perturbation prediction using reinforcement learning

Yale and Google trained a 27B parameter model, C2S-Scale, to unify single-cell transcriptomics and biological language for deep reasoning across genes and cells. It outperforms prior models in interpretation, QA, and perturbation prediction using reinforcement learning
Cancer Cell (@cancer_cell) 's Twitter Profile Photo

Online Now: Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma dlvr.it/TL15CD

T. San Phan (@tgsanphan) 's Twitter Profile Photo

Check out our new study Science Immunology, identifying a distinct molecular signature of treatment-refractory psoriatic arthritis patients🧬 It was an exciting and fun journey with Reut Tzemach, Chamutal Gur, Eyal David, Shuang-Yin Wang IdoAmitLab team

T. San Phan (@tgsanphan) 's Twitter Profile Photo

The skin, a peripheral neuroendocrine hub, produces glucocorticoids (GCs) to regulate homeostasis. It's deficiency results in inflammation🔥 We here show that this only occurs with barrier breach. Intriguingly, bodywide skin GC loss increased adrenal GCs (Skin-HPA axis?)🤯

Javier Garcia-Bermudez (@javigbermudez) 's Twitter Profile Photo

My lab's first paper is out in nature. We show that lipoprotein uptake protects tumors from ferroptosis by delivering the lipid antioxidant α-tocopherol. Surprisingly, tumors use sulfated glycosaminoglycans—not canonical receptors—to capture lipoproteins. nature.com/articles/s4158…

IdoAmitLab (@idoamitlab) 's Twitter Profile Photo

Thank you everyone for the amazing support, we will definitely need your help down the road. We will rebuild everything that is broken - because we are not done.

Thank you everyone for the amazing support, we will definitely need your help down the road. We will rebuild everything that is broken - because we are not done.
Kyle Tretina, Ph.D. (@allthingsapx) 's Twitter Profile Photo

Protein structure ≠ protein folding/dynamics The new north star: energy‑landscape learning, rather than static structure prediction Next wave: AI that learns free energy for "true" inverse folding

Protein structure ≠ protein folding/dynamics

The new north star: energy‑landscape learning, rather than static structure prediction

Next wave: AI that learns free energy for "true" inverse folding
Advanced Bioimaging Center @ UC Berkeley (@abcucberkeley) 's Twitter Profile Photo

Finally here! Our preprint on the MOSAIC, a multimodal adaptive optical microscope enabling non‑invasive in‑vivo imaging from molecules to organisms, is out. biorxiv.org/content/10.110… Eric Betzig Legant lab

Anirban Maitra (@aiims1742) 's Twitter Profile Photo

Absolutely insane amount of data in this resource from Chris Mason The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs biorxiv.org/content/10.110… Spatial data on 15million cells from 100 donors across multiple ages, mainly GI

Absolutely insane amount of data in this resource from <a href="/mason_lab/">Chris Mason</a> 
The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs 
biorxiv.org/content/10.110…
Spatial data on 15million cells from 100 donors across multiple ages, mainly GI
Michael Kosicki (@michaelkosicki) 's Twitter Profile Photo

Enhancers, how do they work (in vivo)? To find out, we mutagenized 7 human enhancers comprehensively in 12bp blocks and scored for activity in developing mouse embryos. rdcu.be/erD22 nature #mutagenesis #noncoding #enhancers

Enhancers, how do they work (in vivo)? To find out, we mutagenized 7 human enhancers comprehensively in 12bp blocks and scored for activity in developing mouse embryos. rdcu.be/erD22 <a href="/Nature/">nature</a>  #mutagenesis #noncoding #enhancers
Katie Galloway (@gallowaylabmit) 's Twitter Profile Photo

Delighted to bring gene circuits into a wide array of primary cells where they can be used for safe, effective gene therapies. 🧵 (1/n) Tremendous work by lead author Kasey Love to dig into the details of these systems and figure out how to get these to work well! Original

Delighted to bring gene circuits into a wide array of primary cells where they can be used for safe, effective gene therapies. 🧵 (1/n)

Tremendous work by lead author <a href="/kaseyslove/">Kasey Love</a> to dig into the details of these systems and figure out how to get these to work well!

Original
IdoAmitLab (@idoamitlab) 's Twitter Profile Photo

Many have asked what is our secret recipe for recovery. In reality there is only one way- you start as fast as you can and slowly accelerate

Many have asked what is our secret recipe for recovery. In reality there is only one way- you start as fast as you can and slowly accelerate
Dr. Dominic Ng (@drdominicng) 's Twitter Profile Photo

CRISPR just scored its biggest win yet against Huntington's. The secret? A delivery system called RIDE that sneaks into neurons, makes its edit, then vanishes in 72 hours. Here's what happened 🧵👇

CRISPR just scored its biggest win yet against Huntington's.

The secret? A delivery system called RIDE that sneaks into neurons, makes its edit, then vanishes in 72 hours.

Here's what happened 🧵👇
Jun Kim (@jun_kiim) 's Twitter Profile Photo

Just published in Nature (June 2025), Andersen et al. (E. Antonio Chiocca, MD, PhD, FAANS, Reardon, Fran Quintana Lab) developed a novel viral barcode interaction-tracing (RABID-seq) platform, uncovering previously unknown immunosuppressive interactions between astrocytes and glioblastoma (GBM) cells.

Just published in Nature (June 2025), Andersen et al. (<a href="/EAChiocca/">E. Antonio Chiocca, MD, PhD, FAANS</a>, Reardon, <a href="/QuintanaLabHMS/">Fran Quintana Lab</a>) developed a novel viral barcode interaction-tracing (RABID-seq) platform, uncovering previously unknown immunosuppressive interactions between astrocytes and glioblastoma (GBM) cells.
Cell (@cellcellpress) 's Twitter Profile Photo

In the latest issue! Cross-organ metabolite production and consumption in healthy and atherogenic conditions dlvr.it/TMPKmR