Thanks for all your help Estibaliz Gómez de Mariscal, PhD !

Day 5 of #EMBOBioImage is for one of our favourite topics: deep learning for bioimage analysis👾 it starts energetically with an early live Q&A for ilastik Team and Anna Kreshuk's Lab: what's your favourite tool🤔 👀😅

Deep Learning is not a quick fix for image processing 🔬🖥️🚫 (with Joanna Pylvänäinen Estibaliz Gómez de Mariscal, PhD and John Bogovic) #EMBOBioImage

I wonder if I spend too much time thinking about aligning multimodal images... The view from our balcony in the Airbnb in #Marseille we stayed at for the #RugbyWorldCup2023 last weekend. Correlative Day and Night Imaging? #NotreDameDeLaGarde #CLEM

Last day of #EMBOBioImage 🧐🤓Sessions are still in full swing and discussions going strong. Wishing everyone a safe trip back later today- and hope to see you next time. 👋

#EMBOBioImage finished yesterday and one still feels excited about the growth of this outstanding community, its diversity, educational&collaborative spirit and the incredible amount of discoveries that is about to come 😍 thanks to organizers for the chance to join you🙏

🚨 We are recruiting postdocs! 🚨 Projects in our lab use a combination of experimental and computational techniques to study mouse visual behaviors and large-scale neural dynamics. See the new lab website: mouseland.github.io

Thoughts on #bioimaging formats (& Randall Munroe) from Jason Swedlow, Josh Moore, David Feng, Beth Cimini 🔬💻 📊, Shuichi Onami, Martin Jones, John Bogovic, Antje Keppler, et al. out now in @nature's recently tech feature by Michael Brooks nature.com/articles/d4158… What are your thoughts? 🤔

🚨 Excited to share our latest preprint about #DL4MicEverywhere 🌋, our very recent contribution to the sparking #DLaugmentedmicroscopy🔬🌟 🎯Our aim this time? Building #accessible, #flexible, #transparent, and #reproducible #DL ecosystems for #BIA 🤹(1/) doi.org/10.1101/2023.1…

With Nataša Sladoje of #MIDAgroup Centre for Image Analysis opening the event #CBIAS2023 with some SOTA #multimodal registration

Want to identify the type of a neuron from a 10 micron fragment of its wiring? SegCLR led to this and other surprising capabilities. An outstanding effort led by Sven Dorkenwald & Peter Li and a wonderful collaboration with the Lichtman lab at Harvard and Allen Institute.

#postdoc and #phdposition available in my lab in Marseille CENTURI - Turing Centre for Living Systems & INMED 🎉🎉 If you are interested in building models of brain computations and developing data analysis tools with cool experimental collaborators, please apply! More info: bit.ly/3MRGiVu

Day 2 of the #CBIAS2023 kicked off by David Barry at The Francis Crick Institute Crick BioImage Analysis Symposium

Check out the latest Neuroscience and Beyond with me as a guest! We talk about a wide range of topics, from image analysis for microscopy to latest developments in AI.

It had been a while since I last needed to process a large chunk of light sheet data on our cluster…. I guess the folks over in scientific computing missed me 😂. Thanks for the amazing gift!

I am thrilled to start an Assistant Professor in the Department of Biological Sciences at @DartmouthCollege in July 2024. We will study genetic & neural basis of behavior evolution & how behavior affects evolution. Recruiting talented & enthusiastic scientists to join the lab!

🚨 Exciting news! 🚨 Check out this data release of 7⃣ FIB-SEM and segmentation volumes from a single P7 mouse as a preprint on bioRxiv 🐁🎉 👉biorxiv.org/content/10.110… Aubrey Weigel John Bogovic Wyatt Korff @preibischs Jeff Rhoades Yurii Zubov