Emergent spatial structure in the gut microbiota is driven by bacterial growth and gut contractions biorxiv.org/content/10.110… #biorxiv_sysbio

Are Solid Particles Ready for Prime-Time Proteomics? biorxiv.org/content/10.110… #biorxiv_sysbio

Cell Painting in activated cells illuminates phenotypic dark space and uncovers novel drug mechanisms of action. biorxiv.org/content/10.110… #biorxiv_sysbio

VerteBrain reveals novel neural and non-neural protein assemblies conserved across vertebrate evolution biorxiv.org/content/10.110… #biorxiv_sysbio

FAIMS-GPF XL-MS: crosslinking-mass spectrometry based on gas-phase fractionation biorxiv.org/content/10.110… #biorxiv_sysbio

How memory and adaptation cost shape cell phenotypic dynamics in response to fluctuating environments biorxiv.org/content/10.110… #biorxiv_sysbio

Spatiotemporal Single-Cell Analysis Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease biorxiv.org/content/10.110… #biorxiv_sysbio

Topoisomerase Based Control of Cellular Transcription and Growth biorxiv.org/content/10.110… #biorxiv_sysbio

SIMBA-GNN: Simulation-augmented Microbiome Abundance Graph Neural Network biorxiv.org/content/10.110… #biorxiv_sysbio

Inference and prediction for random walkmodels in biology biorxiv.org/content/10.110… #biorxiv_sysbio

Global propagation of genetic perturbation effects through genome-wide stoichiometry conservation architecture biorxiv.org/content/10.110… #biorxiv_sysbio

A systems-level machine learning approach uncovers therapeutic targets in clear cell renal cell carcinoma biorxiv.org/content/10.110… #biorxiv_sysbio

Leveraging Dynamic Stability to Infer Regulation in Protein-Protein Interaction Networks: A Study of Infectious Vulnerability in COPD. biorxiv.org/content/10.110… #biorxiv_sysbio

Informed Data-Independent Acquisition Enables Targeted Quantification of Key Regulatory Proteins in Cell Fate Decision at Single-Cell ... biorxiv.org/content/10.110… #biorxiv_sysbio

The genetic architecture of G-protein coupled receptor signaling biorxiv.org/content/10.110… #biorxiv_sysbio

Female cortical cellular mosaicism underlies shared MeCP2 and PCB impacted gene pathways biorxiv.org/content/10.110… #biorxiv_sysbio

Integrating Alternative Fragmentation Techniques into Standard LC-MS Workflows Using a Single Deep Learning Model Enhances Proteome ... biorxiv.org/content/10.110… #biorxiv_sysbio

nanoPhos enables ultra-sensitive and cell-type resolved spatialphosphoproteomics biorxiv.org/content/10.110… #biorxiv_sysbio

EXOSC3 S1-domain variants implicated in PCH1b alter RNA exosome cap subunit abundance and thermal stability disrupting rRNA ... biorxiv.org/content/10.110… #biorxiv_sysbio

BioLogical: a universal analysis framework for biosystem logical dynamic biorxiv.org/content/10.110… #biorxiv_sysbio