Jeroen Van Goey (@biogeek) 's Twitter Profile
Jeroen Van Goey

@biogeek

Staff Research Engineer in BioAI at @InstaDeepAI (part of @BioNTech_Group)
ML for de novo peptide sequencing.
bsky.app/profile/jeroen…

ID: 10564

linkhttp://jeroen.vangoey.be calendar_today26-10-2006 10:16:43

827 Tweet

875 Followers

5,5K Following

InstaDeep (@instadeepai) 's Twitter Profile Photo

Join us on the journey toward improving de novo protein sequencing. 👉Explore their progress in our latest blog post: bit.ly/4lircYB ⌨️ Explore our codebase here: bit.ly/43ExRGl 📝 See the paper on Nature Machine Intelligence: bit.ly/3XBeJFh

Timothy Jenkins (@timothypjenkins) 's Twitter Profile Photo

1/ 🚀 InstaNovo just got a major upgrade. Our Nature Machine Intelligence paper with InstaDeep presents v0.1—but while the paper was under review, we kept building. Now releasing InstaNovo v1.1, with major gains. Blog: bit.ly/4lircYB 🧵

InstaDeep (@instadeepai) 's Twitter Profile Photo

As seen in Nature Machine Intelligence, our multimodal conversational agent, ChatNT, fuses biological sequences and natural language into a shared vocabulary. Hear from research scientist and lead author Bernardo Almeida on our first proof-of-concept for this generalist AI.

InstaDeep (@instadeepai) 's Twitter Profile Photo

ChatNT can optimise multiple tasks simultaneously, in conversational English. Trained on a dataset spanning 27 biological functions and species, including 600 million DNA tokens and 273 million English tokens, ChatNT is designed to be a useful agent for scientists without coding

DeepPCB (@deeppcb) 's Twitter Profile Photo

🆕 Just dropped: @InstaDeepAI's Alain-Sam Cohen on how DeepPCB uses RL to transform PCB layout featured in Emerj’s AI in Business podcast with Editorial Director Matthew DeMello ✅ Week-long designs done in a day ✅ Engineers freed from repetitive tasks ✅ Real-world enterprise

🆕 Just dropped: @InstaDeepAI's Alain-Sam Cohen on how DeepPCB uses RL to transform PCB layout featured in Emerj’s AI in Business podcast with Editorial Director Matthew DeMello
✅ Week-long designs done in a day
✅ Engineers freed from repetitive tasks
✅ Real-world enterprise
DailyHealthcareAI (@aipulserx) 's Twitter Profile Photo

How can we bridge the gap between powerful biological sequence models and user-friendly conversational interfaces for genomics research?Nature Machine Intelligence InstaDeep "A multimodal conversational agent for DNA, RNA and protein tasks" • While conversational language models have

How can we bridge the gap between powerful biological sequence models and user-friendly conversational interfaces for genomics research?<a href="/NatMachIntell/">Nature Machine Intelligence</a> <a href="/instadeepai/">InstaDeep</a> 

"A multimodal conversational agent for DNA, RNA and protein tasks"

• While conversational language models have
Thomas Pierrot (@thomas_pierrot) 's Twitter Profile Photo

Introducing ChatNT: The first biological sequence-language model, published in Nature Machine Intelligence ! 🧬🎉 Inspired by vision-language models, ChatNT's architecture combines biological and language foundation models, using Nucleotide Transformer (NT) and Llama to answer questions

Biology+AI Daily (@biologyaidaily) 's Twitter Profile Photo

A multimodal conversational agent for DNA, RNA and protein tasks Nature Machine Intelligence 1.ChatNT is a new conversational AI system that understands DNA, RNA and protein sequences, enabling biologists to solve complex genomics tasks simply by asking questions in English. 2.Unlike

A multimodal conversational agent for DNA, RNA and protein tasks <a href="/NatMachIntell/">Nature Machine Intelligence</a>

1.ChatNT is a new conversational AI system that understands DNA, RNA and protein sequences, enabling biologists to solve complex genomics tasks simply by asking questions in English.

2.Unlike
Machine learning for protein engineering seminar (@ml4proteins) 's Twitter Profile Photo

Next Tues (6/17) at 4PM ET, we will have Bora Guloglu and Tom Barrett present "Flexible Antibody Design with Multimodal Bayesian Flow Networks" Paper: biorxiv.org/content/10.110… This will be followed by Brian Hie, who will give an early-career talk on Wed (6/18) at 4PM ET!

Biology+AI Daily (@biologyaidaily) 's Twitter Profile Photo

Curriculum Learning for Biological Sequence Prediction: The Case of De Novo Peptide Sequencing 1.RefineNovo introduces a curriculum learning framework for non-autoregressive (NAR) peptide sequencing models, tackling instability in CTC-based training. The model significantly

Curriculum Learning for Biological Sequence Prediction: The Case of De Novo Peptide Sequencing

1.RefineNovo introduces a curriculum learning framework for non-autoregressive (NAR) peptide sequencing models, tackling instability in CTC-based training. The model significantly
InstaDeep (@instadeepai) 's Twitter Profile Photo

ChatNT has been featured on the front cover of Nature Machine Intelligence! This exciting opportunity allows us to share our proof-of-concept for a generalist genomics AI with a wider community of scientists and researchers around the world. 🎊

ChatNT has been featured on the front cover of <a href="/NatMachIntell/">Nature Machine Intelligence</a>!

This exciting opportunity allows us to share our proof-of-concept for a generalist genomics AI with a wider community of scientists and researchers around the world. 🎊
Alex Laterre (@alexlaterre) 's Twitter Profile Photo

We made the cover of Nature Machine Intelligence! 🌱 ChatNT is a Conversational Agent analysing genomics sequences to answer key biological questions, assisting scientists in their work 👩‍🔬 Kudos to Bernardo Almeida, Thomas Pierrot & the InstaDeep research team for this huge milestone!✨

We made the cover of <a href="/NatMachIntell/">Nature Machine Intelligence</a>! 🌱

ChatNT is a Conversational Agent analysing genomics sequences to answer key biological questions, assisting scientists in their work 👩‍🔬

Kudos to <a href="/deAlmeida_BP/">Bernardo Almeida</a>, <a href="/thomas_pierrot/">Thomas Pierrot</a> &amp; the <a href="/instadeepai/">InstaDeep</a> research team for this huge milestone!✨
InstaDeep (@instadeepai) 's Twitter Profile Photo

📆 Six months, four publications, one cover. We’re halfway through the year and InstaDeep research is powering ahead with multiple boundary-pushing papers published in the Nature Portfolio! Catch up on the highlights below 🔽

InstaDeep (@instadeepai) 's Twitter Profile Photo

🧬 In March, we published our research for InstaNovo and InstaNovo+ in Nature Machine Intelligence, our diffusion-powered ‘de novo’ peptide sequencing models built to uncover the secrets of the human proteome. bit.ly/3XBeJFh

Mackenzie Morehead (@mackenziejem) 's Twitter Profile Photo

New Post on Cancer Vaccines They've yet to become a systematic science despite decades of work, 200 trials + an exciting Moderna PII We Compound are excited about more comprehensive assays (full genome sequencing, more relevant readout, etc), novel target spaces & manuf leaps

New Post on Cancer Vaccines 
They've yet to become a systematic science despite decades of work, 200 trials + an exciting Moderna PII
We <a href="/CompoundVC/">Compound</a> are excited about more comprehensive assays (full genome sequencing, more relevant readout, etc), novel target spaces &amp; manuf leaps
Deep Learning Indaba𝕏 South Africa (@deepindabax_za) 's Twitter Profile Photo

HACKATHON ALERT!🔥 The excitement is building as we count down to Deep Learning Indaba𝕏🇿🇦'25, we're absolutely thrilled to officially unveil our highly anticipated Hackathon! Powered by our incredible partners – GroundUp, RadixTrie,Institute of Mine Seismology, InstaDeep & ZINDI

HACKATHON ALERT!🔥
The excitement is building as we count down to Deep Learning Indaba𝕏🇿🇦'25, we're absolutely thrilled to officially unveil our highly anticipated Hackathon!
Powered by our incredible partners – GroundUp, RadixTrie,Institute of Mine Seismology, InstaDeep &amp; ZINDI
Thomas Pierrot (@thomas_pierrot) 's Twitter Profile Photo

Thrilled to open-source the dataset behind our Nature Machine Intelligence cover paper! 🧬 The ChatNT training data is now open-source on Hugging Face. It's the first large-scale dataset for training conversational agents on biological sequences. A thread on what's inside 👇

Deep Learning Indaba𝕏 South Africa (@deepindabax_za) 's Twitter Profile Photo

✨ CELEBRATING OUR DEEP LEARNING INDABA𝕏🇿🇦 2025 PARTNERS! ✨ As we gear up for an unforgettable Deep Learning Indaba𝕏 South Africa 2025, the excitement is electric, and it’s all made possible by the phenomenal support of our visionary partners. #Indaba𝕏SA2025 #Indaba𝕏SA

✨ CELEBRATING OUR DEEP LEARNING INDABA𝕏🇿🇦 2025 PARTNERS! ✨

As we gear up for an unforgettable Deep Learning Indaba𝕏 South Africa 2025, the excitement is electric, and it’s all made possible by the phenomenal support of our visionary partners.
#Indaba𝕏SA2025 #Indaba𝕏SA