🚀 EVENT: Register now to attend the 2024 wimsigAU Conference! 🗓️ Date: 1-2 October, 2024 📍 Location: SydMathInst University of Sydney Take advantage of the Early Bird registration by September 2 and save! 🔗 Register: mathematics.org.au/sys/pages/plai…

STD: Find out how to unlock biological secrets 🤫 and interpret big data📈 at AMSI #BioInfoSummer2024 a three-day national hybrid conference for students, ECR's, & professionals. 📅 3-5 Dec 2024 📍 University of Melbourne & online 👉 @BioInfoSummer

Congratulations Boyi Guo 郭博逸 & Wodan Ling on the new arXiv.org preprint reviewing comp #methods to integrate #spatial #transcriptomics datasets across tissues & individuals 🎉 Fantastic collab w/ Sang Ho (Sangho) Kwon, Pratibha Panwar, Shila Ghazanfar Keri Martinowich. Thank you all & feedback is welcome

🚨𝐇𝐞 𝐋𝐚𝐛 job opportunity UC San Francisco 🚨: I'm hiring TWO postdocs - an experimentalist and a computational biologist. Join us to use cutting-edge single-cell and spatial technologies to unravel the mysteries of human tissues. opportunities.ucsf.edu/content/open-p…

Next Monday, Joshua Ho from HKU Medicine will present: Scalable analysis methods for single cell and spatial omics data and lineage tracing. ⏱️August 12, 1pm (AEST) 👉bit.ly/3WWjSXx

AMSI Summer Research Scholarship 2024-25 applications are now open! 😎 Open to 2nd & 3rd yr undergrads at AMSI Member Unis 😎 6-week research project 😎 $3000 stipend 😎 Present at the AMSIConnect conference in Melbourne 😎 Write a report & blog post Applications close 16 Sept

INTERVIEW: @shazanfarDr attended #AMSIBioInfoSummer in 2013, then returned as a guest speaker in 2015, 2018, 2019 and 2022! As a biomed #datascientist, Shila credits the event as brilliant as she was able to share her skills and knowledge. Read more: amsi.org.au/2024/08/08/mee…

Our research leader Dr Shila Ghazanfar Shila Ghazanfar is a proud Australian Mathematical Sciences Institute (AMSI) alumni! Having first attended AMSI BioInfoSummer in 2013 as a PhD👩🏻‍🎓student, she has since returned frequently as a guest speaker. 🌟 Read more about Shila's research and career: bit.ly/3M4Pmp4

🚨ABACBS 2024 conference abstract submission deadline has been extended to 26th August! Get your abstracts in for the November conference COMBINE Australasian Genomic Technologies Association AGTA

As the new academic year is kicking off, I just wanted to send a reminder that if you are applying to PhD programs or going on the faculty job market, making a simple website for you / res interests is hugely helpful My fav? #Quarto. It's free & easy! quarto.org/docs/websites

Now out - WebAtlas pipeline for visualizing and processing integrated single cell and spatial transcriptomics data ⁦Nature Methods⁩ ⁦Omer Ali Bayraktar⁩ ⁦Haniffa Lab⁩ ⁦Shila Ghazanfar⁩ ⁦Human Cell Atlas⁩ github.com/haniffalab/web… nature.com/articles/s4159…

WebAtlas for visualising single cell & spatial data online is out: rdcu.be/dRsKu With Muzlifah Haniffa Tong LI 李彤 Dave Horsfall+co, we aimed to open up sc/spatial data to biologists & clinicians without coding experience/infrastructure. Rambling🧵on why this matters

Next Monday, Dr Aishwarya Bhaskaran from Macquarie University will present: A maximum penalized likelihood approach for semiparametric accelerated failure time models with time-varying covariates and partly interval censoring ⏱️August 26, 1pm (AEST) 👉bit.ly/3DPCCP3

📢📢Reminder that #ABACBS24 abstracts are due midnight tonight and registrations are officially open! Check out the website for details for submitting to all of the week's events (incl. EMCR Hackathon, BioCAsia etc): abacbs.org/conference2024…

Next Monday, Dr Lulu Shang Lulu Shang from MD Anderson Cancer Center will present: Statistical identification of cell type-specific spatially variable genes in spatial transcriptomics ⏱️September 2, 1pm (AEST) 👉bit.ly/3DPCCP3

#Multiomics2024 conference registrations are now open! 🎉 We have an exciting lineup of over 50 international and national speakers. 🌍🗣️🔬🧪🔭🥼 Don't miss out on this opportunity to learn from the experts. Spaces are limited, so register today at multiomics2024.org

Class slides, notes, and problem sets for my Introduction to Data Science class (updated weekly) are publicly available here: datasciencelabs.github.io/2024/

New single-cell transcriptomic data in IDR! Released today - Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis by Lohoff et al. idr.openmicroscopy.org/search/?query=…

We recruiting two continuing education focused academics (lecturers/senior lecturers) one in stats and one in maths. This is in addition to the 4 outstanding EF academics we recruited in the School earlier this year! Join an excellent and growing team! usyd.wd3.myworkdayjobs.com/USYD_EXTERNAL_…

Exciting opportunity! I am hiring a postdoc to join the group and to develop computational methods for the analysis of biomedical data including imaging and genomics data at a single-cell or spatial resolution 🧬 stephaniehicks.com/join