Chayaporn Nok Suphavilai
@nokcs
ID: 45359327
07-06-2009 15:39:11
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Our new framework, CaDRReS-Sc, for predicting cancer drug response in heterogeneous tumors based on single-cell data. github.com/CSB5/CaDRReS-Sc biorxiv.org/content/10.110… I’m so grateful for the support and guidance from Niranjan Nagarajan @rdasgupt Ankur Sharma :)
We have some "strong" transfer learning mojo for you ... w/ Rafael Peres Chayaporn Nok Suphavilai TUGDA: task uncertainty guided domain adaptation for robust generalization of cancer drug response prediction from in vitro to in vivo settings academic.oup.com/bioinformatics…
What a pleasant surprise to see this out in Genome Medicine! Great collaboration with Chayaporn Nok Suphavilai Ankur Sharma Ramanuj Dasgupta & Shumei Chia
Chayaporn Nok Suphavilai, Karrie Ko : Sentinel-site sequencing in near real-time for detecting clonal outbreak clusters and providing alerts. Our new case study with Oxford Nanopore sequencing for whole-genome characterization of Shigella flexneri isolates frontiersin.org/articles/10.33…
We integrated raw inconsistent drug response data to build an integrative pharmacogenomics database. CREAMMIST provides easy-to-use statistics and uncertainty info for various downstream analyses, such as identifying biomarkers and machine learning models. academic.oup.com/nar/advance-ar…
Brilliant work and collaboration with Chayaporn Nok Suphavilai Karrie Ko Jacquomo Niranjan Nagarajan Discovery of the sixth Candida auris clade in Singapore medrxiv.org/content/10.110…
The MetageNN paper is finally out on bioRxiv! MetageNN outperforms recent machine learning based approaches for taxonomic classification, and shows higher sensitivity than kmer based tools for novel taxa ... w/ Rafael Peres Chayaporn Nok Suphavilai biorxiv.org/content/10.110…
MetageNN - a memory efficient taxonomic classifier - is now out in BMC Bioinformatics #metagenomics #AI MetageNN outperforms other machine learning-based metagenomic classifiers, and shows higher sensitivity than kmer-based tools Rafael Peres Chayaporn Nok Suphavilai tinyurl.com/mvr5th8j
Excited to share our work on city-wide metagenomic surveillance of hawker centres in Singapore! w/Macadology Several surprising findings here ... see thread medrxiv.org/content/10.110…