Dig into our latest September issue! 👀 🍌Virulence factors of banana fungus 🧬Learn about mini-Borgs 🤝Collaborate to tackle outbreaks 🦠Microbiome and autism spectrum disorder and more….. nature.com/nmicrobiol/vol…

Preprint on "BWT construction and search at the terabase scale". We can compress 100 human genomes to 11GB in 21 hours, find SMEMs with it, do affine-gap alignment and retrieve similar local haplotypes. 7.3Tb commonly sequenced bacterial genomes ⇒ 30GB arxiv.org/abs/2409.00613

We’re presenting AlphaProteo: an AI system for designing novel proteins that bind more successfully to target molecules. 🧬 It could help scientists better understand how biological systems function, save time in research, advance drug design and more. 🧵 dpmd.ai/3XuMqbX

Complete T2T genome of carnation 'Baltico' unlocks genome features & breeding insights. Improved annotation, allele-specific expression, & TE insertions impact gene regulation. #CarnationGenome Oxford Journals Details:doi.org/10.1093/hr/uha…

🚀Big day today! MGI officially launched nanopore sequencing products with advanced CycloneSEQ technology, CycloneSEQ-WT02 and CycloneSEQ-WY01. #CycloneSEQ #SeqAll #NanoporeSequencing #LongreadSequencing Read the news here: en.mgi-tech.com/news/507/

CycloneSEQ-WY01 features a high-density flow cell and ultra-high throughput capabilities, enabling ultra-long read lengths, real-time sequencing, and continuous testing. #CycloneSEQ #SeqAll #NanoporeSequencing #LongreadSequencing youtube.com/watch?v=41-7m3…

New preprint using BGI's new nanopore sequencer: Efficiently Constructing Complete Genomes with CycloneSEQ to Fill Gaps in Bacterial Draft Assemblies biorxiv.org/content/10.110…

New blog post at Gencove : "Utilizing RNA-seq for genotype imputation and eQTL mapping without additional genotyping" gencove.com/blog/rna-seq

Oxford Nanopore Technologies to Sue BGI Group Affiliates for Contract Breach genomeweb.com/sequencing/oxf…

Rapid real-time quantitative colorimetric LAMP methodology for field detection of Verticillium dahliae in crude olive-plant samples dlvr.it/TD46nf

Book chapter alert! 🍌 🧫 #banana #fusarium

In just one week I will be representing KeyGene presenting at #PAGAuatralia int he Oxford Nanopore workshop on the banana 🍌 pangenome; pag.confex.com/pag/au2024/mee… Looking forward to catch up!

#EarlyViewAlert👁‍🗨RESOURCE: 1st global inventory of lnRNAs in Cucurbitaceae! 🧬🥒A multispecies study reveals the diversity and potential regulatory role of long noncoding RNAs in cucurbits doi.org/10.1111/tpj.17… CSIC I2SysBio Wiley Plant Science SEB

Published today in nature, we describe an approach for single-molecule protein reading on Oxford Nanopore arrays. By utilizing ClpX unfoldase to ratchet proteins through a CsgG nanopore, we achieved single-amino-acid sensitivity. nature.com/articles/s4158…

A key innovation: rereading individual protein molecules multiple times to improve sequencing accuracy. While there are still technical hurdles to overcome for de novo sequencing, we believe full-length protein fingerprinting is now within reach using seq-to-signal models.

.Jeff Nivala & team at University of Washington unveiled a groundbreaking ‘proof-of-concept’ method showcasing the capability of #nanopore sequencing to read #polypeptide stands — a major step forward in protein analysis. Learn more: lnkd.in/emzmFUzQ

Biologists would love to be able to read out the amino-acid sequence of any protein molecule as they would the letters of a sentence. A system in which a biological motor pulls proteins through a pore brings the dream closer to reality go.nature.com/3MHf43i

Out today in Nature Methods, our first attempt make personalized pangenomes: rdcu.be/dTD3o In the future it will vital to subset pangenomes to just the relevant haplotypes for a compared sample. Work by Jouni Siren, Matteo, Parsa Eskandar, vg team, and many others.