Ahmed Khalil (@ahmed_is_khalil) 's Twitter Profile
Ahmed Khalil

@ahmed_is_khalil

Computational Biologist @IMIDomics, PhD from @NTUsg 🇪🇬🇹🇳🇸🇬🇪🇸 #Computational_biology #Genomics #Data_science

ID: 1320562335799336960

calendar_today26-10-2020 03:06:23

255 Tweet

121 Followers

387 Following

Mo Lotfollahi (@mo_lotfollahi) 's Twitter Profile Photo

(1) This is an amazing paper on the limitations of (current) single-cell foundation models "Our results indicate that both Geneformer and scGPT exhibit limited reliability in zero-shot settings and often underperform compared to simpler methods." biorxiv.org/content/10.110…

(1) This is an amazing paper on the limitations of  (current) single-cell foundation models "Our results indicate that both Geneformer and scGPT exhibit limited reliability in zero-shot settings and often underperform compared to simpler methods."
biorxiv.org/content/10.110…
Peter Van Loo (@vanloolab) 's Twitter Profile Photo

Exciting find in our #OralCancer study! 🧬 Brush biopsies prove promising, reflecting 90% of somatic changes vs. tissue biopsies. 🩸 Highlighting their potential in understanding tumor evolution. #CancerEvolution biorxiv.org/content/10.110…

IRB Barcelona (@irbbarcelona) 's Twitter Profile Photo

🔍🧬#IRBBarcelona researchers discover unexpected patterns in mutation risks across individuals, uncovering 13 distinct genomic patterns. ✍️Dr Fran Supek & Marina Salvadores Ferreiro (Genome Data Science lab). 📰Nature Cancer ➡️bit.ly/3tVjxJT 📌DOI:10.1038/S43018-023-00707-8 #IRBScience

🔍🧬#IRBBarcelona researchers discover unexpected patterns in mutation risks across individuals, uncovering 13 distinct genomic patterns.

✍️Dr <a href="/FranSupek/">Fran Supek</a> &amp; <a href="/msalvadoresf/">Marina Salvadores Ferreiro</a> (<a href="/GenomeDataLab/">Genome Data Science lab</a>).

📰<a href="/NatureCancer/">Nature Cancer</a>

➡️bit.ly/3tVjxJT

📌DOI:10.1038/S43018-023-00707-8

#IRBScience
Guillermo Palou Márquez (@gpaloumarquez) 's Twitter Profile Photo

Excited to share my PhD journey exploring NMD efficiency's variability across tumors, tissues and individuals. Link: biorxiv.org/content/10.110… A big thank you to Fran Supek and the awesome lab Genome Data Science lab at IRB Barcelona 1/7🧵👇

Fran Supek (@fransupek) 's Twitter Profile Photo

🎉Liza's paradoxical paper is out in Nature Comms: nature.com/articles/s4146… The short of it: ➡️driver CNA gains in tumor suppressor genes ➡️driver CNA losses in oncogenes ➡️some negative selection on oncogenes + comprehensive, data driven classification of cancer genes by CNA

Doctis (@doctiseu) 's Twitter Profile Photo

💊The #DocTISProject, dedicated to identifying more effective therapies for #IMIDs, will host a webinar on February 6th. 🎤 Speakers will be: - Sara Marsal - Holger Heyn - Ernest Choy - Pere Santamaria - Maria López Lasanta - Antonio Julià 👉 Register here: attendee.gotowebinar.com/register/87088…

💊The #DocTISProject, dedicated to identifying more effective therapies for #IMIDs, will host a webinar on February 6th.

🎤 Speakers will be:
- <a href="/sara_marsal/">Sara Marsal</a>
- <a href="/hoheyn/">Holger Heyn</a>
- <a href="/ErnestChoy1/">Ernest Choy</a>
- Pere Santamaria
- Maria López Lasanta
- <a href="/ToniJuliaC/">Antonio Julià</a>

👉 Register here: attendee.gotowebinar.com/register/87088…