OpenVariant: a toolkit to parse and operate multiple input file formats academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/bbglab/openvar…

Nucleotide GPT: Sequence-Based Deep Learning Prediction of Nuclear Subcompartment-Associated Genome Architecture biorxiv.org/content/10.110…

Effects of hybridization and gene flow on gene co-expression networks biorxiv.org/cgi/content/sh… #biorxiv_genetic

Tokenvizz: GraphRAG-Inspired Tokenization Tool for Genomic Data Discovery and Visualization biorxiv.org/content/10.110…

I'm happy to announce our next computational genomics course for 2025. The deadline for application is January 30th 2025. We will cover: - AI-assisted data analysis - Spatial omics analysis - Multi-omics data analysis. More info is here: bioinformatics.mdc-berlin.de/compgen/2025/

Looking for reviewers before Christmas

PathoFact 2.0: An Integrative Pipeline for Predicting Antimicrobial Resistance Genes, Virulence Factors, Toxins and Biosynthetic Gene Clusters in Metagenomes biorxiv.org/content/10.110…

Great news! The #EMABG this time as European Master in Animal #Biodiversity and #Genomics was funded again by the EACEA !!! The call for FULL scholarship applications is open until 28th Feb 2025! For details see emabg.eu Please share this message widely.

Uni Oldenburg is starting a genomics facility, and we are looking for a bioinformatician. uol.de/en/job/bioinfo… The position is initially for 3 years, but there are chances of permanency after the 3 years. Please share!

BetaAlign: a deep learning approach for multiple sequence alignment academic.oup.com/bioinformatics…

VirDetector: A bioinformatic pipeline for virus surveillance using nanopore sequencing academic.oup.com/bioinformatics… 🧬🖥️🧪 Nextflow github.com/NLKaiser/VirDe… ...surprised no mention of nf-core/viralrecon

Principled PCA separates signal from noise in omics count data biorxiv.org/content/10.110…

AI just killed PowerPoint. No more endless hours creating PPT. Here are 8 websites to create presentations with AI in seconds:

BioMaster: Multi-agent System for Automated Bioinformatics Analysis Workflow biorxiv.org/content/10.110…

Applications are open for IBT 2025 - a course designed to equip you with essential #bioinformatics skills. Apply by 17 March: tinyurl.com/IBT-2025 Join the course to gain hands-on experience & expand your knowledge in this exciting field! #AfrigenD #TrainingOpportunity

Africa-led means control too. Not just PIs, but research, data, and decisions must be based in Africa

📢 Scholarly Truth Bomb 📢 Bioinformatics isn't just a symphony of elegant plots—it's 90% wrestling unruly data into submission 🤹‍♂️📊 and 10% actual analysis.

STRkit: precise, read-level genotyping of short tandem repeats using long reads and single-nucleotide variation biorxiv.org/content/10.110…

Sketch, capture and layout phylogenies biorxiv.org/content/10.110… 🧬🖥️🧪 github.com/husonlab/phylo…