Join the IBIS Challenge: an open competition focused on the computational prediction of transcription factor binding motifs. IBIS aims to advance state-of-the-art methods for Inferring Binding Specificities of human transcription factors from diverse experimental data. (1/12)

So, the Stanford Ribonanza RNA Folding competition is closed, the private leaderboard is now available. Our team has secured the first place!
kaggle.com/competitions/s…

Soon we will publish a detailed description of our solution

The long-awaited update of HOCOMOCO, the database of transcription factor binding motifs, received a major update after 5 years of efforts, see hocomoco12.autosome.org
and doi.org/10.1093/nar/gk…
/cc Vanja (Ivan Kulakovskiy) Arsenii Zinkevich (1/15)

(1/8)The LegNet paper is finally published doi.org/10.1093/bioinf….
Congrats to Vanja (Ivan Kulakovskiy) Elizaveta N Daria Nogina Arsenii Zinkevich

This is huge: Llama-v2 is open source, with a license that authorizes commercial use!

This is going to change the landscape of the LLM market.
Llama-v2 is available on Microsoft Azure and will be available on AWS, Hugging Face and other providers

Pretrained and fine-tuned

Our work is getting even stronger than expected! Dmitry and Daria have obtained great results on different data and I (personally) can't wait for them to be finally presented to the community.

(1/n) We have released a preprint on an EfficientnetV2-based neural network architecture for predicting promoter activity and variant effects in DNA regulatory regions! - biorxiv.org/content/10.110…

(1/4) Excited to share our recent success: autosome.org scored solid 1st place in the DREAM 2022 'Sequence to expression' (synapse.org/#!Synapse:syn2…) challenge!

Congratulations to the team including Daria Nogina
Vanja (Ivan Kulakovskiy)
Arsenii Zinkevich