Generation of in situ sequencing based OncoMaps to spatially resolve gene expression profiles of diagnostic and prognostic markers in breast cancer sciencedirect.com/science/articl…

I just published How Exactly UMAP Works link.medium.com/1OTTnhoLu0

Was so looking forward to playing it after the defense... 😩

On my way now. Very excited!

Thrilled to see presentation from De Strooper Lab using CARTANA #insitusequencing. Proud to be part of such exciting project

Check out the results of the 2018 Data Science Bowl and learn about automated segmentation of cell nuclei! nature.com/articles/s4159…

CARTANA is on a retreat! 🥳 We are taking a day off at Nyköping to recharge and be ready for more projects!

Paper by Xiaoyan Qian Kenneth D Harris MatsNilssonLab on In Situ Probabilistic Cell Typing by #InSituSequencing is out! nature.com/articles/s4159… #SingleCell #Spatial Human Cell Atlas

Probabilistic cell typing by in situ sequencing (pciSeq), leverages previous single-cell RNA sequencing classification and multiplexed in situ RNA detection to spatially map cell types. nature.com/articles/s4159…

I am extremely happy to announce that our human developmental heart atlas study is now published in Cell! A big thanks to everyone who made this possible, it has been such a pleasure working with all of you! authors.elsevier.com/c/1aDRcL7PXYXAw

Next iteration of in situ sequencing is now out as a preprint bioRxiv. We show improved robustness and flexibility of Hybridization-based in situ sequencing (HybISS) on human brain sections with goals towards a spatial human cell atlas.🧠🔬🧬 disq.us/t/3lupqeo

TODAY IS WORLD BRAIN DAY. Great work from Wei-Ting Chen and De Strooper Lab from VIB who published a paper in Cell using CARTANA In Situ Sequencing to study Alzheimer's Disease in mouse and human brain tissue! #neuroscience #Alzheimer #InSituSequencing

get in the car it’s august